Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cmaq_0998 |
Symbol | |
ID | 5710211 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Caldivirga maquilingensis IC-167 |
Kingdom | Archaea |
Replicon accession | NC_009954 |
Strand | - |
Start bp | 1050984 |
End bp | 1052351 |
Gene Length | 1368 bp |
Protein Length | 455 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 641275499 |
Product | tRNA CCA-pyrophosphorylase |
Protein accession | YP_001540819 |
Protein GI | 159041567 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1746] tRNA nucleotidyltransferase (CCA-adding enzyme) |
TIGRFAM ID | [TIGR03671] CCA-adding enzyme |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.465929 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 0.410879 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCCTAATG TTGAGGATAT TGTTAAGGAG GCCCTTAGGA TCGTTACCCC CAGTCAGAGT GAGGTTAAGG TAATTAACGA TACTGCCTCA GAGGTAATGC ATATACTTGA GGGGATGCTG CATAAATTAG GCCTTGAGGC TGAGGTTACT TTACAGGGTT CTATTGCCCA CGGTACTTGG CTACCTGGGG ATAGGGATAT TGATGTTTTC TTAATTTTCC CACACAATGA GAAGTACATT AACCTTGTTA AGTCAGGGGA ATTGGTGAGG AGCCTAGCCG CGGCGATTTC AGAAATGGGT ATAAGCTGGG TCATGAATTA CGCTCAACAC CCCTACTTAA CGTTAACCTA CAATGGCTTT AACATTGACG TAGTTCCATG CATTAGGATT AGGCCTGGTG AAAAACCAGT AACAGCCGCT GATAGAACCC CCCTCCACAC ACTTTACTTA AGGGGTAGGT TAAGTGGCCT TGAGGATGAT GTTAGGTTAC TTAAGTTAAT GATGAAGAGG ATTAACGTCT ATGGCGCCGA GGTTAAGGTT CAAGGCTTCA GCGGTTACTT GACTGAATTA ATCACGTTAG CCTACGGGGG CTTCATAAAT ACTCTTAAGG CAGCCTCAAG GTGGATCCCA TTCAAGGTTA AGATAATTCT TGAACCATCA AAGCAAGTTA ACTTTAATGC ACCATTAGTT GTCATTGATC CAGTTGACCC AGGTAGGAAT GCTGCTGCAG CCGTCTCCCT AGACTCAATG GCGATCTTCA TAGCAGCATC CAGGCGTTTC CTTAAGAAAC CAAGCATGGT TTTCTTCACC AACAGTGCTC AATCACCCTC AGAATCATTA ACACTAACCA CACCAACATT AATCCTGTAT GGTGAGTACC CTAAGGGTTA CGTGGAGGAT ATTATTTGGG GTCAATTAAG GAGGATTGCA TCAACAATAT GGAGTACTGT GAGTAGCAGT GGCTTTAAAC CAATTGACAT AGGCCTCTAT ACGCCGCAGG ACAATTACAT TGTAGTAATG CTTACTGTTG AGGAACCTGA GTTACCTGAG TATGAAATAC ACATGGGTCC CCCTGTTTGG ACTGATGAGG CTGAGGCATT CATTGAGAAG TACCTTAACG CCAGTAATGT GGTTGGCCCA TTCATAAGGA ATGGAAGGTG GTTTGTGATT AGGCCTAGAA GGATTAAGAG TATTAAGGAA GCCGTGGCCA AGAGTCTTAA GACTGTTAGA GGCAGTGTTG TTAAGGATTC CCTACTTAAG GGTCGTGTAG TTTTACTACG TGATGCTAGT CAAGTTAATG AGCTACCAGT GGAGTTAAGG GGCATTGCGT TAACCTTCAT GGGTAAGAGG CCTCACTGGC TTACCTAA
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Protein sequence | MPNVEDIVKE ALRIVTPSQS EVKVINDTAS EVMHILEGML HKLGLEAEVT LQGSIAHGTW LPGDRDIDVF LIFPHNEKYI NLVKSGELVR SLAAAISEMG ISWVMNYAQH PYLTLTYNGF NIDVVPCIRI RPGEKPVTAA DRTPLHTLYL RGRLSGLEDD VRLLKLMMKR INVYGAEVKV QGFSGYLTEL ITLAYGGFIN TLKAASRWIP FKVKIILEPS KQVNFNAPLV VIDPVDPGRN AAAAVSLDSM AIFIAASRRF LKKPSMVFFT NSAQSPSESL TLTTPTLILY GEYPKGYVED IIWGQLRRIA STIWSTVSSS GFKPIDIGLY TPQDNYIVVM LTVEEPELPE YEIHMGPPVW TDEAEAFIEK YLNASNVVGP FIRNGRWFVI RPRRIKSIKE AVAKSLKTVR GSVVKDSLLK GRVVLLRDAS QVNELPVELR GIALTFMGKR PHWLT
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