| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cmaq_0990 |
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| Symbol | |
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| ID | 5710061 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Caldivirga maquilingensis IC-167 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009954 |
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| Strand | - |
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| Start bp | 1043722 |
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| End bp | 1045029 |
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| Gene Length | 1308 bp |
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| Protein Length | 435 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641275491 |
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| Product | tryptophan synthase subunit beta |
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| Protein accession | YP_001540811 |
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| Protein GI | 159041559 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1350] Predicted alternative tryptophan synthase beta-subunit (paralog of TrpB) |
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| TIGRFAM ID | [TIGR01415] pyridoxal-phosphate dependent TrpB-like enzyme |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 0.499392 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | TTGGGTAAGT CACTAAGCCA GTATAGGGTA GACCTACCTC CAGATGAAAT CCCAGATCAC
TGGTACAATA TACTCGCTGA TCTTCCTGAA CCACTCCCAC CGCCTCAGGA TCCTGATAAT
GGGAGGAGAC TTGAATTGCT TAAGAAAGTC ATACCCTCTG AGCCCCTAGG CTTCGAATTC
TCCACGGAAA GATTCATTAA AATACCTGAT GAGGTGCGTG AAAGGTATAT CCAGGTTGGT
AGACCAACAC CATTGATTAG GGCTAGGAGG TTTGAGGAGT ACTTGGATGC CCCAGTTAAA
ATATACCTTA AAATGGAGGG TTATACTTAC ACGGGGAGTC ATAAGATTAA CTCAGCCTTA
GCCTGGGTCT ACTATGCGCT TAAGGATGGT GCGAGATTAG TCACCACTGA GACTGGGGCT
GGGCAATGGG GTGCTGCGGT TGCCTTGGCT TCAGCCTTAT TTAAGGTTAA GGCACACATA
TTCATGGTTA AGGCAAGCTA CAACGCCAAG CCGCTTAGGA GGTTCCAAAT GCAGATGTAT
GGAGCCGACG TTCATGCAAG CCCCAGTGAA TTAACGGAAT TCGGAAGGAG GCTACTGAAG
GAGAATCCCA ATCACCCAGG TAGCCTAGGT GTAGCCATAA CCGAGGCCGC GGAGTACGCG
CTTAATAATG GTGGTAAGTA CGTTGTCGGC AGTGTTATAA ACACTGACAT ATTATTTAAG
ACTGTTGCTG GACTTGAGGC TAAGAGGCAG CTTGAGTTAA TAGGCGAGGA CCCTGATGTA
ATGATAGGGG TAGTGGGTGG TGGTAGTAAT TGGGGTGGGG CCTTTTACCC ATTCATGGGT
GATGAACTCA GAAGCGGGAG GGTTAGACGG AGGTATATCG CCGTAGGCGC CTCTGAGGTG
CCTAAGGTTA CTAAAGGCGT CTACAAGTAT GATGACCCAG ACACAGGTAG GGTTCTACCA
CAGTTGAAGA TGTACACAAT AGGCTCAGAC TTCATTCCAC CACCCATTTA CGCAGGGGGG
TTGCGTTATC ATGCAGTTGC CCCAACCTTA TCATACTTAA TGAGCAAGGG TTACGTGGAG
GGGAGGGATT ATGACCAGGA CACCGTGTTT AAGATGGCTC AAGTATTCGC ACAGGTTGAA
GGCTACATAC CCGCACCAGA GACTGCGCAT ACTCTACCAG TAATTAAGGA GATTGCTGAT
GAAGCCAAGA GAACTGGTGA AAGAAAAGTC ATATTAGTTA GCTTCAGTGG CCATGGCCTG
CTTGACTTAG GTAACTTCGC TGATGTATTA GGGTTTGGAA AGGCATAA
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| Protein sequence | MGKSLSQYRV DLPPDEIPDH WYNILADLPE PLPPPQDPDN GRRLELLKKV IPSEPLGFEF
STERFIKIPD EVRERYIQVG RPTPLIRARR FEEYLDAPVK IYLKMEGYTY TGSHKINSAL
AWVYYALKDG ARLVTTETGA GQWGAAVALA SALFKVKAHI FMVKASYNAK PLRRFQMQMY
GADVHASPSE LTEFGRRLLK ENPNHPGSLG VAITEAAEYA LNNGGKYVVG SVINTDILFK
TVAGLEAKRQ LELIGEDPDV MIGVVGGGSN WGGAFYPFMG DELRSGRVRR RYIAVGASEV
PKVTKGVYKY DDPDTGRVLP QLKMYTIGSD FIPPPIYAGG LRYHAVAPTL SYLMSKGYVE
GRDYDQDTVF KMAQVFAQVE GYIPAPETAH TLPVIKEIAD EAKRTGERKV ILVSFSGHGL
LDLGNFADVL GFGKA
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