Gene Cmaq_0987 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCmaq_0987 
Symbol 
ID5709381 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaldivirga maquilingensis IC-167 
KingdomArchaea 
Replicon accessionNC_009954 
Strand
Start bp1039578 
End bp1040693 
Gene Length1116 bp 
Protein Length371 aa 
Translation table11 
GC content50% 
IMG OID641275487 
Productradical SAM domain-containing protein 
Protein accessionYP_001540808 
Protein GI159041556 
COG category[R] General function prediction only 
COG ID[COG1313] Uncharacterized Fe-S protein PflX, homolog of pyruvate formate lyase activating proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value0.499392 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCTTGGG CCTCCTACAG GCCCGATGCA GTAACAATAT GGAGAGAACA GGCAGTGCGG 
GAGAGGCTAA ACTGGTATTA CGCAGTTATG CGTGACTTAG CACCGGCGAA GTTTCACATA
GCGGCTAGGA TAGAGGCCCC TAATGATTAC GTATCCATGG ATGACGCGGA GCTGTGGAGG
ATTCATGATG AGCTTGGGCA TACCTTCGAT GAGGAGTGGA TGCAGCAGAG GGAGCGACCG
GATACCTCAC TGGTGTGGAA GGACCTGCCT CAAGCCTCCT TCCTCGACGT CAAGATAGAG
CTGGCTAGAA GACAGTTGAG GCATTGTATG CTATGTGAGA GGAGGTGTGG TGTGGATAGA
ACCATCAAGC GTGGAGCCTG CCTCCTAAAC GCCAAGGCCC GTGTGGCAAG CTTCTTCCAC
CACATGGGGG AGGAGGCACC ACTAGTGCCC TCTGGCACAG TGTTTTTCAC TGGCTGCAAC
TTCCGCTGCG TTTACTGTCA GAACTGGGAT ATATCGCAGA GACCTGAGAA TGGTGTTGAG
GTCACGCCAG GGGAATTAGC CGCTATCCAA GCTAAGTTGA GGGAAGATGG GGCACGTAAC
ATTAACTGGG TTGGTGGTGA ACCAACCCCC AGCATCCCAT TCATCTTAGA GTCGTTGAAG
ATTCTCGCTA AGCGAAGAAT TAATGTACCC CAGCTTTGGA ACTCCAACAT GTATCTAACA
CCAGAGAGCT TAAGCTTGAT ACTACACGTC ATGGATATAT GGCTCCCAGA CTTCAAATAT
GGAAACAATG CCTGTGCCCT GAGGTATTCT GTGGCTCCCC GTTACTGGGA TGTGACCACG
AGGAATCTCT CAGTAATATG TAAAAGAGGG GAGGATATCA TTATACGTCA CCTAGTGCTC
CCAAGCCACG TCAACTGTTG CACGAAGCCC GTGCTCCGAT GGATAGCGGA GAATTGCAAG
AGGGCTCTCG TTAATATAAT GGATCAGTAT CATCCCGATT ACTTAGTCTC ATCATCTAAA
TACATGGAGA TGAACAGATT AGTCTCAAAG AGGGAAATGG GGGAGGCCTA TCAATATGCT
GATGAACTCG GACTAGTCTG GAGACCGATT AGTTGA
 
Protein sequence
MAWASYRPDA VTIWREQAVR ERLNWYYAVM RDLAPAKFHI AARIEAPNDY VSMDDAELWR 
IHDELGHTFD EEWMQQRERP DTSLVWKDLP QASFLDVKIE LARRQLRHCM LCERRCGVDR
TIKRGACLLN AKARVASFFH HMGEEAPLVP SGTVFFTGCN FRCVYCQNWD ISQRPENGVE
VTPGELAAIQ AKLREDGARN INWVGGEPTP SIPFILESLK ILAKRRINVP QLWNSNMYLT
PESLSLILHV MDIWLPDFKY GNNACALRYS VAPRYWDVTT RNLSVICKRG EDIIIRHLVL
PSHVNCCTKP VLRWIAENCK RALVNIMDQY HPDYLVSSSK YMEMNRLVSK REMGEAYQYA
DELGLVWRPI S