| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cmaq_0984 |
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| Symbol | |
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| ID | 5710256 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Caldivirga maquilingensis IC-167 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009954 |
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| Strand | - |
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| Start bp | 1034978 |
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| End bp | 1036639 |
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| Gene Length | 1662 bp |
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| Protein Length | 553 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 641275485 |
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| Product | thiamine pyrophosphate protein central region |
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| Protein accession | YP_001540806 |
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| Protein GI | 159041554 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 0.351073 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCGTGATC TTGTTTCAGA ATGGTTAATA AATAATGTTG GTAATTACGT GTTTACAGTT
GCCGCTGAAA ATATTCTGGG TTTATTAAGG TCTTTAATCA ATAGGGGAGG GTTCATTATT
AATTCTAAGT TTGAGCCTTC AGCAGGCTTC ATGGCATTAG TTTCATCAAG GCTCCTACTT
AAGCCCAGTA CACTAATCGT TACCGCTGGT CCAGGGATAT TTGGTGCATT ATCACCCATT
GCTGAGGCAT TCATTGAGGG TGATCCATTA ATTGTCATTG CCACATCCAT AATTGGTGGT
AAGGGTACAC GCATGCATCA AATACGTGAC GACACTCAAT TAAACACGTT AAGTAATGTT
GTTAAGGCAT CCCTTAGAGT AAGTAATCCA AGTAACGTTA CTGAGGTTTT AACTAAGGCG
TATAGAATTG CAACAAGTGG TAAACCCGGC CCAGTTTACA TTGATATACC ATCCGACTTA
ATGGACTTAG ACACCACCGG TGAACGTAAG GATGTAAACC CTGTTACTGG GGAAACAGTA
GCAATCAATA ATGATGCCGT TAAGGAAGCA GCCAACCTAC TCTCCAATGC TGAATTACCT
GTCCTACTCC TAGGTAGGGG TGTTATCTTA TCCGGCGCTA AGGATTTGGC GATTAAATTG
GCTGAATTAC TGAATGCGCC AATCACAACA ACAATAATGG CTAAGGGGTT AATATCACCT
AATCATCCCC TCTACGCCGG TGTAGCCGCT GGTAAGGCAG GTAACATGAC TGCCTATGAG
ATTATTAAGA AAGCTGACGT AGTGCTTGCT ATTGGTAATA GATTCAGTGA AATTGGCACT
GGTAGGTATA GTCTTGAGAT TAGGGGTAAG CTCATTCACG TTAACATTGA TGAGTATGAT
TTAGGAAGGG CGTATGAACC ATATTTAAGG ATACGGGCTG ATGCTAAGGA ATTCCTCCTA
ATGCTAATTA ATGTACTTAA GGGCATGAGT ATTAGACGTA GAGGTGGTGT AATTAATGAA
TTAAGGGAAT TATGGAGTAT TGAGAATAGG GAGCTTAATA GTTACTACGA GAAGGCTACA
GGCTTAATTA AGCCCTGGGA GGTTATTAGG GCGGTTAGGG ATGTTTTCAA CAAGGGTGGA
TCAATATTCA TTGGTGATGT TGGGGCTCAC AGGATTGAAA GCTTCCTAAT GCCCATAAAC
GAGAATGAAC ACTACGTAAC AAGCACCAGC TACGTCTCAA TGGGGTTAGC AGTACCTGGC
GCCGTGGCTG CATCAATAAT ATACCGTGAC AGGGATGTTG TTGCCTTGGT TGGTGATGGT
GGATTCCTAA TGACTGGGCT TGAGGTTGCA ACTGCTGTTC AATATGGGGT TAAGCCCAAG
ATAATTGTAT TCAATGATTC AGCGTACAGG GTATTGAGGA TTTACGAGAA GGTGAGGTTC
AGTAATGCAA CCGAATCATT AATTAAACTA CCCAGCATTG ACTTCAACCT ATTAGCCGAA
TCCCTGGGTG CGGAGGGTTT AAGGATAACA CGTAGGGAGG AGTTGAGGCC GTTGTTGAAT
GAGGCTTTAA ACAGTGACAA GGCCACAATC GTAGATGTGC ACATTGATCC TAACACAATC
CCAATACCGT ACCAGAGGTT ATACGGTTTA AACACCATTT AA
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| Protein sequence | MRDLVSEWLI NNVGNYVFTV AAENILGLLR SLINRGGFII NSKFEPSAGF MALVSSRLLL
KPSTLIVTAG PGIFGALSPI AEAFIEGDPL IVIATSIIGG KGTRMHQIRD DTQLNTLSNV
VKASLRVSNP SNVTEVLTKA YRIATSGKPG PVYIDIPSDL MDLDTTGERK DVNPVTGETV
AINNDAVKEA ANLLSNAELP VLLLGRGVIL SGAKDLAIKL AELLNAPITT TIMAKGLISP
NHPLYAGVAA GKAGNMTAYE IIKKADVVLA IGNRFSEIGT GRYSLEIRGK LIHVNIDEYD
LGRAYEPYLR IRADAKEFLL MLINVLKGMS IRRRGGVINE LRELWSIENR ELNSYYEKAT
GLIKPWEVIR AVRDVFNKGG SIFIGDVGAH RIESFLMPIN ENEHYVTSTS YVSMGLAVPG
AVAASIIYRD RDVVALVGDG GFLMTGLEVA TAVQYGVKPK IIVFNDSAYR VLRIYEKVRF
SNATESLIKL PSIDFNLLAE SLGAEGLRIT RREELRPLLN EALNSDKATI VDVHIDPNTI
PIPYQRLYGL NTI
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