| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cmaq_0976 |
|---|
| Symbol | |
|---|
| ID | 5708623 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Caldivirga maquilingensis IC-167 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009954 |
|---|
| Strand | + |
|---|
| Start bp | 1027042 |
|---|
| End bp | 1028028 |
|---|
| Gene Length | 987 bp |
|---|
| Protein Length | 328 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 641275477 |
|---|
| Product | putative deoxyhypusine synthase |
|---|
| Protein accession | YP_001540798 |
|---|
| Protein GI | 159041546 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG1899] Deoxyhypusine synthase |
|---|
| TIGRFAM ID | [TIGR00321] deoxyhypusine synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 39 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACCATG AGGAGAGGGT TGCTGATGCA GAGTTAGGTG CTAAGTCAAT TAAGGACCTT
ATTGAATCCT ACAACCTCAT TGGTGGTTTC ATGGCCAGGA ACCTTTACGA TGCATCCAGG
GTACTTGCCT CAATGTACAG TGATCCTGAC GTCACAGTGA TACTATCATT CACAGCTAAC
CTAGTCTCCA CAGGACTTAG GGGTATTTTA AGAGGTATAA TAGAGAGGGG GCTTGCTGAT
GTAGTCATTA CCACGGCGGG TACGGTGGAT CATGACGTGG CTAAGTCACT TGGCGGAGTC
TACTTTAAAG GCTCCTTCGA CATTGATGAC TCAGTACTAT TAAGTAAGGG TATTCATAGG
ATAGGGAACG TATTCGTTAG GAAGGAGCAC TATGGGCCAC TTGTTGAGAA GGCTGTTCAC
TCGACTTTAA GTAAGGTTAA TGCAAGTGAG ATTGGTGTAA GGGAGTTGCT GTGGCTTATG
GCTGATGAAT TAGATGACTC ATCAATAATA AAGGCATCTA AGAGGAGTTG CGTACCAATA
TACATACCTG GGTTTGTTGA TGGGGCCTTT GGTACAGCAA TACTGACTTA CAATGAGGTT
CAGAGGACTA GGTCAGGGGG TAGGAGGATT AACGTTAATG TACTTAAGGA TGAGGAGGAG
ATAATGAATA TAATTTACTC AAGTAAGAAG CTTGGCGCCG TAATAATAGG TGGGGGTATT
AGTAAGCACC ACGTCATATG GTGGAGTCAA TTCAAGGGTG GGTTAGATTA CGTCGTCTAC
TTAACCACAG CCACAGAGTG GGATGGATCA TTAAGCGGCG CTAGGCCTAA GGAGGCGGTT
AGCTGGGGTA AGGTTAAGCC GGAGGCTAAG TCAGCCTTCG TCCTGGCTGA TGCCACAATA
ACTGTACCAA TACTATTCAA CTACATAGCC TCAGAGGTGG GTTTCAGGAA GAGGAACATG
GGTGTTTACC CATGGAATTG CCAATAA
|
|---|
| Protein sequence | MNHEERVADA ELGAKSIKDL IESYNLIGGF MARNLYDASR VLASMYSDPD VTVILSFTAN
LVSTGLRGIL RGIIERGLAD VVITTAGTVD HDVAKSLGGV YFKGSFDIDD SVLLSKGIHR
IGNVFVRKEH YGPLVEKAVH STLSKVNASE IGVRELLWLM ADELDDSSII KASKRSCVPI
YIPGFVDGAF GTAILTYNEV QRTRSGGRRI NVNVLKDEEE IMNIIYSSKK LGAVIIGGGI
SKHHVIWWSQ FKGGLDYVVY LTTATEWDGS LSGARPKEAV SWGKVKPEAK SAFVLADATI
TVPILFNYIA SEVGFRKRNM GVYPWNCQ
|
|---|
| |