| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cmaq_0968 |
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| Symbol | rpl10e |
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| ID | 5708590 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Caldivirga maquilingensis IC-167 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009954 |
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| Strand | - |
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| Start bp | 1017433 |
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| End bp | 1017960 |
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| Gene Length | 528 bp |
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| Protein Length | 175 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641275469 |
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| Product | 50S ribosomal protein L10e |
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| Protein accession | YP_001540790 |
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| Protein GI | 159041538 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0197] Ribosomal protein L16/L10E |
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| TIGRFAM ID | [TIGR00279] ribosomal protein L10.e |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.000124621 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 49 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCCATTAA GGCCTGCTAG GTGTTATAAA AGGATCAAGA GACCGTACAC TAGGCTGAAG
TATATTCACG GCGCCCCCTA CGTCCAGATA CCTAGGTTTG AGATGGGGGC CACTAAGGCT
AAGGACAGGG AGAGGTTTAC TTCAGTTGCA GTGCTTAGGG TTCTTGAGGG TGGTCAAATT
AGGGTTAATG CCCTTGAGGC TGCTAGGCAG ATGGCCTATA AGTACTTATC TAAAGTCCTA
ACGGATCAAA ACTTCTACCT GAAGATAATT AAGTACCCCC ACCATGTTAT TAGGGAGAAT
AAGATGTTAG CTATGGCTGG TGCCGACCGT TTACAGGAAG GTATGAGGCT TGCCTTCGGT
GTACCCACTG GTAGGGCTAT TCAGATTGAG CCTGGGGAGG TTTTAATGAT TGTTGAGGTT
GAGGATAGGA ATATTACCCA CGCTAAGGAG GCGTTGAATA GGGCTAGGGC TAAGTTACCG
TTACCCTGTA GGATTGAGTT AACGAGGAAG TCAGTAATCA AAGGCTAA
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| Protein sequence | MPLRPARCYK RIKRPYTRLK YIHGAPYVQI PRFEMGATKA KDRERFTSVA VLRVLEGGQI
RVNALEAARQ MAYKYLSKVL TDQNFYLKII KYPHHVIREN KMLAMAGADR LQEGMRLAFG
VPTGRAIQIE PGEVLMIVEV EDRNITHAKE ALNRARAKLP LPCRIELTRK SVIKG
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