Gene Cmaq_0958 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCmaq_0958 
Symbol 
ID5709234 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaldivirga maquilingensis IC-167 
KingdomArchaea 
Replicon accessionNC_009954 
Strand
Start bp1005495 
End bp1006379 
Gene Length885 bp 
Protein Length294 aa 
Translation table11 
GC content41% 
IMG OID641275459 
ProductUbiA prenyltransferase 
Protein accessionYP_001540780 
Protein GI159041528 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0382] 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones53 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCAAGTA AGGTAACCGG TGTCGTTAAG TTAGGTAGGA TGGAGCACGG TTTATTAGCC 
GCAATAACCG TGGTGGCCTC CTATTACGTT TCCGGTGGAC GTAATGGTTA CGTGTCCTTA
ATATTGTTTG CATCAACATT CTTCGCTGAG GTATTCCTCT TCGTAACAAA TGATATTCAC
AATATTAATG AGGATAGGAT TAACAGGCCA AACGCACCCT TAGTGATGGG GGTGGTTACA
TTTAGGGAGG CCCTCTGGTT AGGGTTAGTA TCCTTAGTAC TATCCTTTAT TCAAGTAATA
CCTGTAGTCA TGGATTGGGC TAATTCACTC TCATTAATAG TACTGGCAAC AGCATTAGTG
CTTGGTTACC TGTATAATTC AAGGCTTAAG CGGGTAATGA TTATTAACAA TGTGGTGGTT
GCGTTGGTTA CATCATTAAC ATACCTTTAC GGCTTAGCCT CAGTAAAGGT GATTAAGCCT
CAGCCATCAT TATTCATAAC CCTACTCTTC CTAACCACAG TGGTTGCCAC ATTAGGTAGG
GAAATAGTGA AGGGTTCACT TGATTATGAG GGGGACTTAA AGGTGGGTGT ACGTACGATA
GCTACTACGT ATGGGAGGGA TACCGCTAAT AAGGCTGGTT CAATAGTGAT GATGATTGCA
GTCGCATTAT CTATTCCATT AATAATCGTA TCATCAGCTG TCCTAGGTAG GTTTAGCTCA
TTATTCATAA TCTTCATAAT CCTAACCGAC TCCTTAATCC TAACCCTCTC AATAAGGGTA
ATTAAAGGTA ATTTAAGGTT GTTCAGGGAA TTAAGCCTAC TGGCAATGGG ATTAACCCTA
ATTGGTCTAA TGCTTTGCTC TCTGCTTATC TTCATCTACA CTTAG
 
Protein sequence
MASKVTGVVK LGRMEHGLLA AITVVASYYV SGGRNGYVSL ILFASTFFAE VFLFVTNDIH 
NINEDRINRP NAPLVMGVVT FREALWLGLV SLVLSFIQVI PVVMDWANSL SLIVLATALV
LGYLYNSRLK RVMIINNVVV ALVTSLTYLY GLASVKVIKP QPSLFITLLF LTTVVATLGR
EIVKGSLDYE GDLKVGVRTI ATTYGRDTAN KAGSIVMMIA VALSIPLIIV SSAVLGRFSS
LFIIFIILTD SLILTLSIRV IKGNLRLFRE LSLLAMGLTL IGLMLCSLLI FIYT