Gene Cmaq_0946 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCmaq_0946 
Symbol 
ID5708664 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaldivirga maquilingensis IC-167 
KingdomArchaea 
Replicon accessionNC_009954 
Strand
Start bp992804 
End bp993151 
Gene Length348 bp 
Protein Length115 aa 
Translation table11 
GC content39% 
IMG OID641275447 
Productribosomal protein L29 
Protein accessionYP_001540768 
Protein GI159041516 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0255] Ribosomal protein L29 
TIGRFAM ID[TIGR00012] ribosomal protein L29 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones52 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGGAGA AGGTTAAGTT GAGGGATCTT AAGAACATGA GTAGAGAGGA TAGGTTAAGG 
CTACTTAATG AGCTTAGGAG CGAATTAATA AGGCTAGAGA CCCAAAGAGG TAGGGGTGTT
GTTGATAATC CAGGGAGAAT GAGGTACGTT AGGAGACTAA TAGCTAGAAT ACTTACAATT
GAGCATGAGA CTGAGTTGAA TGATTTAAGA AATAGGATAA ATGAATTGGT TAAGAAGGGG
GTATCGTATG ATAAGGTTTC AATGCAATTG GGTATTAAAA AATCAACCTT AAGAAGGATA
CTGAGGGTCA CGAAACCCAG TACCTCTACT AAACCTACCC AGCAATAA
 
Protein sequence
MPEKVKLRDL KNMSREDRLR LLNELRSELI RLETQRGRGV VDNPGRMRYV RRLIARILTI 
EHETELNDLR NRINELVKKG VSYDKVSMQL GIKKSTLRRI LRVTKPSTST KPTQQ