| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cmaq_0943 |
|---|
| Symbol | |
|---|
| ID | 5709410 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Caldivirga maquilingensis IC-167 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009954 |
|---|
| Strand | + |
|---|
| Start bp | 990136 |
|---|
| End bp | 991134 |
|---|
| Gene Length | 999 bp |
|---|
| Protein Length | 332 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 641275444 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001540765 |
|---|
| Protein GI | 159041513 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0730] Predicted permeases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 0.829697 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 50 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTGAGTA TATTTGCAAG GCTACTGATA TTCGTGGAAA TACTTGTGGC AAGTATATTA
GCTGGCTTAT TGGGGTCATT AACAGGATTA GGGGGTGGTA CAGTCCTAGT TCCTGTATTA
ACGCTCTTCC TAGGTATACC GATAGCCTAC GCAGCTGGTG CAGCCTTAAT ATCAACAATA
TCAACATCCA GTGGTGCAGC TAGTGCATAC ATAAAGGATA AGATAACTAA TATTAGAATT
GGTATGGGTC TTGAAATAGC CACAACCACT GGTTCAATAG TTGGGTCATT AACGGTCGCC
TACATTTACT CACATAACTT AGAGTGGATA GTGTACGTTG TCTTCGGTAT AGTTATATTA
ATGTCAATAA TACCAACCGC CCAGAGGAGT AAGTATGAGA TCCCTGACCC TAAGCCGCCT
GATTGGACAA CTAAGGTGTT TAAGCTATAT GGTAGTTACT ATGATGATGC CTTGAAGATG
GAGGTTAAGT ATTGGGGTGT TCGTTGGTGG TTGGGTGAGT TGATTATGTT TTTTGCTGGT
TTTATTAGTG GTTTGCTTGG TATTGGTAGT GGTGCTTTGA AGGTTCTCGG TATGGATTGG
GCAATGAACC TACCAATGAA GGTAAGCACA ACAACAAGCA ACTTCATGAT AGGAGTAACA
GCAGCCACAG GGAGTAGTAT ATACTGGTAC CTGGGCTATA TTCAACCATT CATAGCTGCA
GCCACCGCTA TCGGAGTGCT AATAGGTGCA ATGGCTGGTA CAAGGATACT AGTTAGAATA
ACTAATAAGC AGGTTAGGTG GGTGTTCTTA GCTATATTAG CCTTCTTAGG TATGGAGATG
CTGCTTAGGG GCTTATATTT GAATCACCTA CTAGTTATAC CAGTGGCGTT ACAGTACGCG
TTAAGCCTAG CATTCACAGT GGTGGTGATG GTTACATTAT TCTATAAGTA TGGATTAAGG
ACTAAGGTTA TTGAACGTAA GGGTGAGATG CATGGTTAA
|
|---|
| Protein sequence | MLSIFARLLI FVEILVASIL AGLLGSLTGL GGGTVLVPVL TLFLGIPIAY AAGAALISTI
STSSGAASAY IKDKITNIRI GMGLEIATTT GSIVGSLTVA YIYSHNLEWI VYVVFGIVIL
MSIIPTAQRS KYEIPDPKPP DWTTKVFKLY GSYYDDALKM EVKYWGVRWW LGELIMFFAG
FISGLLGIGS GALKVLGMDW AMNLPMKVST TTSNFMIGVT AATGSSIYWY LGYIQPFIAA
ATAIGVLIGA MAGTRILVRI TNKQVRWVFL AILAFLGMEM LLRGLYLNHL LVIPVALQYA
LSLAFTVVVM VTLFYKYGLR TKVIERKGEM HG
|
|---|
| |