Gene Cmaq_0938 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCmaq_0938 
Symbol 
ID5710278 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaldivirga maquilingensis IC-167 
KingdomArchaea 
Replicon accessionNC_009954 
Strand
Start bp984295 
End bp986517 
Gene Length2223 bp 
Protein Length740 aa 
Translation table11 
GC content45% 
IMG OID641275439 
Productelongation factor EF-2 
Protein accessionYP_001540760 
Protein GI159041508 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0480] Translation elongation factors (GTPases) 
TIGRFAM ID[TIGR00231] small GTP-binding protein domain
[TIGR00484] translation elongation factor EF-G
[TIGR00490] translation elongation factor aEF-2 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones53 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAGTTA GAGTTGTTGA GAAGAGGATA GAGGATATTC TAGAGATAAT GAGGAATCCA 
TCACAGATTA GGAATGTTGG TACATTGGCG CACGTTGACC ATGGTAAAAC AACTACAACG
GATTCACTAC TCATGGGTGC TGGTTTACTT AGCCCTAAGG TTGCAGGTAA GGCGCTTGCC
TTGGATTACG TTGAGATTGA GCAGATAAGG CAAATGACCG TTAAGGCAGC TAACATAAGC
CTATACTTCG AGTACGGTGG TAAACCCTAC CTTATAAACT TCGTTGATAC ACCAGGCCAC
GTTGACTTCA CGGGGCATGT GACTAGGTCA CTTAGGGTAA TGGATGGTGC ACTTGTTGTT
GTTGATGCAG TGGAGGGTGT TATGACTCAA ACCGAGACTG TGGTTAAGCA GGCTATGGAG
GAGATGGTTA GGCCAGTGCT CTTCATTAAT AAGATAGATA GGTTAATTAA GGAGCTTAGG
TTACCTCCAC AGGACATTGG TAATAGAATA CTCTACATTA CTAAGGAGTT TAACTCACTC
ATTGACTCAT ACGCGCCACC TGAGTTTAAG GAGAAGTGGA AGGTTAGTGT TAATAAGGGG
CAGGTTGCGT TTGGTTCAGC CTTAAGTAAG TGGGGTTTAA CAATACCAAT GATGCAGGAG
AAGGGTATTA AGTTCAGTTA CATAATGGAT GCCTACGAGA GGAATGCCGT TGATGAGCTT
GCTCAGGAAT TCCCACTCTA CAGGACTCTG TTAACCATGA TTATAGAGCA TATTCCACCA
CCTGATGTTG CTCAGAAGTA CAGGGTACCT AAGCTGTGGA AGGGTGATTT GAATAGTCCA
GTGGGGAAGG CTTTACTTGA CGCTGACCCT AATGGCCCAT TAGTCATAGC TATAAGTAAG
ATAAATAAGG ATCCCCATGC AGGCTTAATA GCCACTGGTA GAGTCTTCAG TGGAACCATT
AGGGAGGGGG ATGAGGTTTA CATAATTGGG CAGAAGATAA CTAAGAAGGT TCTTCAAACA
TACCTATACA TGGGTCCTAA TAGGATAATA GTGCCCGAGG TTACTGCAGG GAACATAGTG
GCGTTAATGG GTGTTGATGA GGCCAGGGCT GGTGATACTC TTGTGGCGAC GGCGCTTAAG
GATATTCCAC CATTCGAGAA GATGAGGTAT GTGTCTGAGC CAGTGGTTAC GGTAGCCATA
GAGCCTAAGA ATCCTAATGA TTTAGCTAAG CTAGTTGAGG GTCTTAGGGA TCTGGTTATT
GAGGATCCAA CGTTAAGCCT TAAGATTGAT GAGGAGACTG GGCAAATACT GCTGAGTGGT
GTTGGTACAC TGCACCTTGA GATAGCCACA TGGTTACTTA AGGATAGGAC TGGCCTAGAC
TTCGTTGTTT CACAACCATT GGTTAGGTTT AGGGAGACTG TTAGGGCTAG GTCACAGGTC
TTTGAGGGTA AGTCACCTAA TAAGCATAAT AGGCTATACA TAAGTGTTGA ACCACTTGAC
GAGGAGTCCA TTAGCCTAAT ACAGTACAGT GAGGTAACTG AGGATATGGA TCCGAGAGAG
AGGGCTAGGA TACTTAGGGA GAAGGCTAAT TGGGATACTG ATGAGGCTAG GGGTATTTGG
GCAATAGATA ACCAGTACAT TAACGTGCTC ATTGATAAGA CCAGTGGTAT TCAACACCTC
AGGGAGATTA GGGATTACAT AGTTCAAGGC TTCAGATGGT CAATGTCAGC TGGACCATTG
GCCCAGGAAC CAATAAGGGG TGTTAAGGTA ATACTACATG ACGCAGTGGT TCATGAGGAT
CCAGCCCACA GGGGTCCAGC TCAAATAATG CCCGCCACCA AGAATGCAAT ATTCGCCAGC
TTCCTCTCAG CCAACCCAAC GCTGCTTGAG CCTCTCCTAC TGATTGACGC TAAGACCACG
GTGGATAACA TGGGTCCAGT AACCAGTGTA ATAACTAGGC ATAGGGGTAG GGTTATTGAT
GTTACTCAGA CTGAGACAAT GGAGGTGATT GTTAAGGGTG AAATACCTGT AATAGAGTCA
TTCAACATAA GTGATGAGCT TAGAAGCGCC ACAACAGGTA GAGTCTTCTG GAGCCTACAA
TTCTCACGCT GGGCACCAGT GCCTGAAAGC CTTCGTGAAA GCTTAATACT ATCGATTAGG
GAGAAGAAGG GGTTACCTAA GGAGTTACCT AAGATTGAGG ACTACATTTC GACGATTGCA
TAA
 
Protein sequence
MSVRVVEKRI EDILEIMRNP SQIRNVGTLA HVDHGKTTTT DSLLMGAGLL SPKVAGKALA 
LDYVEIEQIR QMTVKAANIS LYFEYGGKPY LINFVDTPGH VDFTGHVTRS LRVMDGALVV
VDAVEGVMTQ TETVVKQAME EMVRPVLFIN KIDRLIKELR LPPQDIGNRI LYITKEFNSL
IDSYAPPEFK EKWKVSVNKG QVAFGSALSK WGLTIPMMQE KGIKFSYIMD AYERNAVDEL
AQEFPLYRTL LTMIIEHIPP PDVAQKYRVP KLWKGDLNSP VGKALLDADP NGPLVIAISK
INKDPHAGLI ATGRVFSGTI REGDEVYIIG QKITKKVLQT YLYMGPNRII VPEVTAGNIV
ALMGVDEARA GDTLVATALK DIPPFEKMRY VSEPVVTVAI EPKNPNDLAK LVEGLRDLVI
EDPTLSLKID EETGQILLSG VGTLHLEIAT WLLKDRTGLD FVVSQPLVRF RETVRARSQV
FEGKSPNKHN RLYISVEPLD EESISLIQYS EVTEDMDPRE RARILREKAN WDTDEARGIW
AIDNQYINVL IDKTSGIQHL REIRDYIVQG FRWSMSAGPL AQEPIRGVKV ILHDAVVHED
PAHRGPAQIM PATKNAIFAS FLSANPTLLE PLLLIDAKTT VDNMGPVTSV ITRHRGRVID
VTQTETMEVI VKGEIPVIES FNISDELRSA TTGRVFWSLQ FSRWAPVPES LRESLILSIR
EKKGLPKELP KIEDYISTIA