Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cmaq_0938 |
Symbol | |
ID | 5710278 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Caldivirga maquilingensis IC-167 |
Kingdom | Archaea |
Replicon accession | NC_009954 |
Strand | + |
Start bp | 984295 |
End bp | 986517 |
Gene Length | 2223 bp |
Protein Length | 740 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 641275439 |
Product | elongation factor EF-2 |
Protein accession | YP_001540760 |
Protein GI | 159041508 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0480] Translation elongation factors (GTPases) |
TIGRFAM ID | [TIGR00231] small GTP-binding protein domain [TIGR00484] translation elongation factor EF-G [TIGR00490] translation elongation factor aEF-2 |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 53 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCAGTTA GAGTTGTTGA GAAGAGGATA GAGGATATTC TAGAGATAAT GAGGAATCCA TCACAGATTA GGAATGTTGG TACATTGGCG CACGTTGACC ATGGTAAAAC AACTACAACG GATTCACTAC TCATGGGTGC TGGTTTACTT AGCCCTAAGG TTGCAGGTAA GGCGCTTGCC TTGGATTACG TTGAGATTGA GCAGATAAGG CAAATGACCG TTAAGGCAGC TAACATAAGC CTATACTTCG AGTACGGTGG TAAACCCTAC CTTATAAACT TCGTTGATAC ACCAGGCCAC GTTGACTTCA CGGGGCATGT GACTAGGTCA CTTAGGGTAA TGGATGGTGC ACTTGTTGTT GTTGATGCAG TGGAGGGTGT TATGACTCAA ACCGAGACTG TGGTTAAGCA GGCTATGGAG GAGATGGTTA GGCCAGTGCT CTTCATTAAT AAGATAGATA GGTTAATTAA GGAGCTTAGG TTACCTCCAC AGGACATTGG TAATAGAATA CTCTACATTA CTAAGGAGTT TAACTCACTC ATTGACTCAT ACGCGCCACC TGAGTTTAAG GAGAAGTGGA AGGTTAGTGT TAATAAGGGG CAGGTTGCGT TTGGTTCAGC CTTAAGTAAG TGGGGTTTAA CAATACCAAT GATGCAGGAG AAGGGTATTA AGTTCAGTTA CATAATGGAT GCCTACGAGA GGAATGCCGT TGATGAGCTT GCTCAGGAAT TCCCACTCTA CAGGACTCTG TTAACCATGA TTATAGAGCA TATTCCACCA CCTGATGTTG CTCAGAAGTA CAGGGTACCT AAGCTGTGGA AGGGTGATTT GAATAGTCCA GTGGGGAAGG CTTTACTTGA CGCTGACCCT AATGGCCCAT TAGTCATAGC TATAAGTAAG ATAAATAAGG ATCCCCATGC AGGCTTAATA GCCACTGGTA GAGTCTTCAG TGGAACCATT AGGGAGGGGG ATGAGGTTTA CATAATTGGG CAGAAGATAA CTAAGAAGGT TCTTCAAACA TACCTATACA TGGGTCCTAA TAGGATAATA GTGCCCGAGG TTACTGCAGG GAACATAGTG GCGTTAATGG GTGTTGATGA GGCCAGGGCT GGTGATACTC TTGTGGCGAC GGCGCTTAAG GATATTCCAC CATTCGAGAA GATGAGGTAT GTGTCTGAGC CAGTGGTTAC GGTAGCCATA GAGCCTAAGA ATCCTAATGA TTTAGCTAAG CTAGTTGAGG GTCTTAGGGA TCTGGTTATT GAGGATCCAA CGTTAAGCCT TAAGATTGAT GAGGAGACTG GGCAAATACT GCTGAGTGGT GTTGGTACAC TGCACCTTGA GATAGCCACA TGGTTACTTA AGGATAGGAC TGGCCTAGAC TTCGTTGTTT CACAACCATT GGTTAGGTTT AGGGAGACTG TTAGGGCTAG GTCACAGGTC TTTGAGGGTA AGTCACCTAA TAAGCATAAT AGGCTATACA TAAGTGTTGA ACCACTTGAC GAGGAGTCCA TTAGCCTAAT ACAGTACAGT GAGGTAACTG AGGATATGGA TCCGAGAGAG AGGGCTAGGA TACTTAGGGA GAAGGCTAAT TGGGATACTG ATGAGGCTAG GGGTATTTGG GCAATAGATA ACCAGTACAT TAACGTGCTC ATTGATAAGA CCAGTGGTAT TCAACACCTC AGGGAGATTA GGGATTACAT AGTTCAAGGC TTCAGATGGT CAATGTCAGC TGGACCATTG GCCCAGGAAC CAATAAGGGG TGTTAAGGTA ATACTACATG ACGCAGTGGT TCATGAGGAT CCAGCCCACA GGGGTCCAGC TCAAATAATG CCCGCCACCA AGAATGCAAT ATTCGCCAGC TTCCTCTCAG CCAACCCAAC GCTGCTTGAG CCTCTCCTAC TGATTGACGC TAAGACCACG GTGGATAACA TGGGTCCAGT AACCAGTGTA ATAACTAGGC ATAGGGGTAG GGTTATTGAT GTTACTCAGA CTGAGACAAT GGAGGTGATT GTTAAGGGTG AAATACCTGT AATAGAGTCA TTCAACATAA GTGATGAGCT TAGAAGCGCC ACAACAGGTA GAGTCTTCTG GAGCCTACAA TTCTCACGCT GGGCACCAGT GCCTGAAAGC CTTCGTGAAA GCTTAATACT ATCGATTAGG GAGAAGAAGG GGTTACCTAA GGAGTTACCT AAGATTGAGG ACTACATTTC GACGATTGCA TAA
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Protein sequence | MSVRVVEKRI EDILEIMRNP SQIRNVGTLA HVDHGKTTTT DSLLMGAGLL SPKVAGKALA LDYVEIEQIR QMTVKAANIS LYFEYGGKPY LINFVDTPGH VDFTGHVTRS LRVMDGALVV VDAVEGVMTQ TETVVKQAME EMVRPVLFIN KIDRLIKELR LPPQDIGNRI LYITKEFNSL IDSYAPPEFK EKWKVSVNKG QVAFGSALSK WGLTIPMMQE KGIKFSYIMD AYERNAVDEL AQEFPLYRTL LTMIIEHIPP PDVAQKYRVP KLWKGDLNSP VGKALLDADP NGPLVIAISK INKDPHAGLI ATGRVFSGTI REGDEVYIIG QKITKKVLQT YLYMGPNRII VPEVTAGNIV ALMGVDEARA GDTLVATALK DIPPFEKMRY VSEPVVTVAI EPKNPNDLAK LVEGLRDLVI EDPTLSLKID EETGQILLSG VGTLHLEIAT WLLKDRTGLD FVVSQPLVRF RETVRARSQV FEGKSPNKHN RLYISVEPLD EESISLIQYS EVTEDMDPRE RARILREKAN WDTDEARGIW AIDNQYINVL IDKTSGIQHL REIRDYIVQG FRWSMSAGPL AQEPIRGVKV ILHDAVVHED PAHRGPAQIM PATKNAIFAS FLSANPTLLE PLLLIDAKTT VDNMGPVTSV ITRHRGRVID VTQTETMEVI VKGEIPVIES FNISDELRSA TTGRVFWSLQ FSRWAPVPES LRESLILSIR EKKGLPKELP KIEDYISTIA
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