| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cmaq_0917 |
|---|
| Symbol | |
|---|
| ID | 5708751 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Caldivirga maquilingensis IC-167 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009954 |
|---|
| Strand | - |
|---|
| Start bp | 962094 |
|---|
| End bp | 962822 |
|---|
| Gene Length | 729 bp |
|---|
| Protein Length | 242 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 641275419 |
|---|
| Product | bacterio-opsin activator |
|---|
| Protein accession | YP_001540740 |
|---|
| Protein GI | 159041488 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3413] Predicted DNA binding protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 36 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 55 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTAATAA TGCAGGTTAA TTACCTTGAT ATTAGTCGTG GATTCACTTA TGTTGAGTTT
GATTATGTTC ATAAGGTTGA TTGGACGTAT AAGGCCAGTG GCTATGAATT CAGTTACAAT
GTTGTTGAAT CATACATTAA TGAAACTGGG AAGTACGCCC TAGAGTTCGC TATACTTAGG
GTTAATGATA AGGCAACGCT TAGGGGCATA CTGAATATTA TTAGAAGTGA TGGTAATGTT
AAGGAGGTTA TTAAAGTGAC ACCATTAAAC ACAGGGTACC CTAAGAGGGT TAGCATTATC
ATAAGGGTTA AGTTAGATAA TTCCACTAGG TTTAGGGCCT ATAGGCTAGG TGGTATTGAG
GTTAAGGACA CTATAATTAA TGGCGTGGAG AATTGGGGAT TCGCATTACC AAGTTCAAGT
GAGGTTAAGA GGCTTAAGCA ATACTTAACA ATGGGTGGTG AGGTTAAGGA TATGAGAACC
AGGCGTATTA ACGCTGATGA ATTAATATAC ATGACCATCC ACAGTAAATT AACCCCATTC
CTAAGCAAGG GTGAGTTAAA AGTATTGAAG ACGGCGTATG AATTAGGATA CCTAAGTGAA
CCAAGGAGAA CCACGTTAAG TAAGGTCGCG GACACATTAG GATTATCCAC CACCACTGTG
AATTATGAAA TAAGGAGGGG AATATACAAG CTACTAACCC TAATACTAAG AGGAATAATT
AACACCTAA
|
|---|
| Protein sequence | MLIMQVNYLD ISRGFTYVEF DYVHKVDWTY KASGYEFSYN VVESYINETG KYALEFAILR
VNDKATLRGI LNIIRSDGNV KEVIKVTPLN TGYPKRVSII IRVKLDNSTR FRAYRLGGIE
VKDTIINGVE NWGFALPSSS EVKRLKQYLT MGGEVKDMRT RRINADELIY MTIHSKLTPF
LSKGELKVLK TAYELGYLSE PRRTTLSKVA DTLGLSTTTV NYEIRRGIYK LLTLILRGII
NT
|
|---|
| |