| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cmaq_0907 |
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| Symbol | rps3p |
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| ID | 5710445 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Caldivirga maquilingensis IC-167 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009954 |
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| Strand | - |
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| Start bp | 950672 |
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| End bp | 951382 |
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| Gene Length | 711 bp |
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| Protein Length | 236 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 641275409 |
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| Product | 30S ribosomal protein S3P |
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| Protein accession | YP_001540730 |
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| Protein GI | 159041478 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0092] Ribosomal protein S3 |
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| TIGRFAM ID | [TIGR01008] ribosomal protein S3, eukaryotic/archaeal type |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 54 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCCACTG CACAGCAAAG GAGGTTACCG ATGTATAAGA GGATTATTGA TGATAATAAG
AAGAAGTGGA TGATTAAGGA GTACCTTAAC ATAGCCTTAA CCAGGAATAG GTATGTTGAT
TCAATAATTC AGAGAACAAC ATTAGGTACA AGGATCGTTA TTATTGCGGA GAAGAAGAAC
AGGATTATAG GTAGGAAGGG GCAGCAGGTT AAGGCTCTTG CAGATATACT TAAATCCAAG
TTCAACCTAG ATAATGTAGT TATAGATGTG ATACAGGAGC CGCATCCTGA GTATAATGCT
AGGTTAGTTG CCCTTAGGAT AGCTGATGCA ATGGCTAAGG GAATCAGGTT CAGGAGGGCT
GCCATAATAG CCCTCAGGCA GCTTCAGGAG GCTAATGTTC AGGGTGCTGA AGTAATAATA
AGCGGTAAGT TAACCACTGA ACGTTCAAGG TTCGAGAAGT ACACTACAGG TATAGTAATT
AAGGCTGGTC AAGACGCCCT CGAGAAGGTT CAGGAAGCTG TAATACCCGT ACTGCTTAAA
CCAGGTATAT TCTCGGTTAG GGTCAGGGTA CTACCCCCTG ATGCGAAGCT TAGTGATAGG
TTTGAGGTTA AGTCACCTGA GGAGGTTCAG GTTAAGCAGA TTGAGAATAA GCCCGAGGAG
GGCAGTGAGA GTAAGGAGGG TAGTGAATCA CCTGGCCAAG CCCAGCAATA A
|
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| Protein sequence | MATAQQRRLP MYKRIIDDNK KKWMIKEYLN IALTRNRYVD SIIQRTTLGT RIVIIAEKKN
RIIGRKGQQV KALADILKSK FNLDNVVIDV IQEPHPEYNA RLVALRIADA MAKGIRFRRA
AIIALRQLQE ANVQGAEVII SGKLTTERSR FEKYTTGIVI KAGQDALEKV QEAVIPVLLK
PGIFSVRVRV LPPDAKLSDR FEVKSPEEVQ VKQIENKPEE GSESKEGSES PGQAQQ
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