| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cmaq_0901 |
|---|
| Symbol | |
|---|
| ID | 5710477 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Caldivirga maquilingensis IC-167 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009954 |
|---|
| Strand | - |
|---|
| Start bp | 943857 |
|---|
| End bp | 945005 |
|---|
| Gene Length | 1149 bp |
|---|
| Protein Length | 382 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 641275404 |
|---|
| Product | glutamine--scyllo-inositol transaminase |
|---|
| Protein accession | YP_001540725 |
|---|
| Protein GI | 159041473 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0399] Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.343988 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 45 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTTAAGT GGCCTCCGGT TAACTCAGAT GATGAGAAGT CTTTACTTGA GGCATTCAGG
AGCGGTAAAT GGGGCAGAGT CCCCGGCGGT GTTGTGGAGG AGTTTGAGAG GGAGTTCTCA
AGGTACCATG AGGCTAAGTA CGCCGTGGCA GTAACAAGTG GCACAGCGGG TTTATTCCTA
AGCTACCTAG CCGTTGGGTT AAATGAGGGG GATTACTTCG CGTTACCGGC CTACACCTTC
ATAGCCACTG CAACAGCCGG TGTACTGCTT AGGGCTGTGC CAGTCTTCAT TGATATTGAT
GCTGAAACCC TCAACATAAG TGTTGATTCA CTTAAGGCTA TTCTTGAGCA GGATAAGGAT
AATAAAATTA AGTTAATCGT CCCAGTTCAC TTCTCCGGAA TACCCGCTGA ACTTGATGGT
GTCATTAATG AGGCTAGGAG ACATGGAGCT AAGGTTATTG AGGATGCGGC ACAGGCTCAT
GGAGCCGTGT ATAAGGGTCG TAAAGTTGGA GCAATAGGTG ATGCAGGCGT CTTCAGTTTC
CAGAGTAGTA AGAATATGAC TGCTGGGGAA GGTGGAGTTA TTGTGACTAA TGATTATGAA
ACCTACATTA GGGCTTGGTC CTACCATAAC GCTGGTAGGG AAATTAACGG TGAATGGTAC
ATGCATATGC TTATCGGGTG GAACTTCAGG ATGACTGAAC TCCAGGCGGC AATACTATTA
TCTCAACTTA AACGCTACGA CGATGAGTTT AAGGTTAGGG AGAGGAACGC TAGGTTACTT
TATGAAATTC TTGAGGGAGT TGAGGACTTT AGGCCGATTA AACCACCTGA CTATGTCTCT
AGTTCAAACC ACCTCCTCCC AATATGGATT AGTAGTAGGT TGATTAACCA GTATGGGAAG
GCTAGGATAG TTAATGAGGT TAATAAGAGG GGAGGCGTGA TTGTTGAGGG TTACCCAATG
CCACTTTATA GGCAACCAGC CTTCAGGGAG GCGTACTGGA AATTACCCGA CTACTCCAGG
TTAAACCTAC CTGTGACTGA GGATGCGTGC AGGAGGGTTG TGTGGGTGCC TCAGCATGTA
CTGCTTAGTG AGGATGAGAC TAGGAGAACC GCTGAGGCAT TGATTAAGGT ATCTAAGGAA
TTGAAGTAA
|
|---|
| Protein sequence | MVKWPPVNSD DEKSLLEAFR SGKWGRVPGG VVEEFEREFS RYHEAKYAVA VTSGTAGLFL
SYLAVGLNEG DYFALPAYTF IATATAGVLL RAVPVFIDID AETLNISVDS LKAILEQDKD
NKIKLIVPVH FSGIPAELDG VINEARRHGA KVIEDAAQAH GAVYKGRKVG AIGDAGVFSF
QSSKNMTAGE GGVIVTNDYE TYIRAWSYHN AGREINGEWY MHMLIGWNFR MTELQAAILL
SQLKRYDDEF KVRERNARLL YEILEGVEDF RPIKPPDYVS SSNHLLPIWI SSRLINQYGK
ARIVNEVNKR GGVIVEGYPM PLYRQPAFRE AYWKLPDYSR LNLPVTEDAC RRVVWVPQHV
LLSEDETRRT AEALIKVSKE LK
|
|---|
| |