| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cmaq_0892 |
|---|
| Symbol | |
|---|
| ID | 5709660 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Caldivirga maquilingensis IC-167 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009954 |
|---|
| Strand | - |
|---|
| Start bp | 932239 |
|---|
| End bp | 933795 |
|---|
| Gene Length | 1557 bp |
|---|
| Protein Length | 518 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 641275394 |
|---|
| Product | metal dependent phosphohydrolase |
|---|
| Protein accession | YP_001540716 |
|---|
| Protein GI | 159041464 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1078] HD superfamily phosphohydrolases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 46 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGTCGTGGA AGGAGCTTAG GGATCCTATA CATGGCTGGA TTAGGTTAAG TATTGATGAG
GCTAGGCTAC TGGATGATGA TGTCTTTGTG CAGAGGCTTA GGAGAATAAC GCAGGATGGT
TTAGCTCATT ACGTTTACCC ATCAGCTAGG GGGAGTAGGT TTGAGCATAG TTTAGGCACG
ATGTACTTAG CCACATTAAT GGTGGAAAGG GTGCTGAGTG AAGCTAATGA GCAGAGTCTT
AGATCCTTAA TGGATGCGCT TGGGCTTCAT GATGAGGGAG TCAGCGCCAT AAGGCAGTAT
GTTAGGTTAA GTGGACTGCA TCACGACATT GGTCACCCAC CCTTATCCCA CGTCCTAGAT
GGCTACGTAT CATCATTAGT TAAGCCTAAT CAGGTACTTT ACACTGCAGG GTTGGGGAAG
GAACATGAGG TAGCTGGGTT AATGATAATG GGTTCAGGTA AATTCAGGAG AATAATTAGT
AGCCTAGGTA TTGATGCAGG CATCCTTAGG GTAATAACAT TCTATAGGTT AATTAAAAGA
GTAAGATTAA TCACCCAATA CGGTTCAGTT AACTTAGAGG CAAGTATACC TGAAGTTAAA
TTGCTAAGCA ATATGAGTGA TGATGAGACC ATGCTCCTGG AATCCCTTGC TTCAATAGTT
TCAGGGGGTA TAGATGCTGA TAGGCTTGAT TATACGCTTA GGGATCTTTA CTTCACTGGT
GCTGGGTCTG GGAGTGGGGC AATTGATATT GCAAGGCTAG TTAATTACCT GCATTTAGGC
AGGGGGATTC TTATATTTGA TGATAAAGCA AAGGCATTCC TGGAGGGTTA CGCAATAGCC
AGGTATAATC TATATAAGTG GGTTTACATG CATCATAAGG TTCTTCAATA CGATGAAATG
CTAAGGGAGG TTTTCAGAAG CATAATAATG CTTGAGAAGG CTAAGGGTTT CAAGACCGCT
GCAATCAACT TCCTTAACGG GAACCCCAAT GAAGATGACC TAGACATATA TACTGATGAT
TACTTAGAAG CCATGCTTAG TGAAGCTTAC CATGAAGGGT TGATTAATGG TTACGTTAAG
GATTATGCAG ATTCAATACT ACACAGGAGG ACTAGTATGA GGGCTTTATG GAAGAGGGAT
GAGGATTACA TAATGATTTT CGGCCTAGGT AACGCAATAA TGCTTAATAA GTACATTGAT
GAACAAGTAG GGGTACATGG GTTGAATTGG GTTAATGAAT TCAAGACTAG GGTGGTTAAT
GAAATGAAGG AGACCCTTAA CTGTGATTGC AAGATACTGG TCTCCACAGC ATCATTCAGT
AATGATATAA GTACATTCGT TAGAAGTAAC GATGGGTCAT TAATAACCAT CACTGAAGTA
TCCCCCTTAA TAAAGGCTAT TGATAATGCA TGGGAGCAAA CCCCACACGT ATTCGTATTC
ATTGACCCAA GTGAATTAAG TAAGAACGGT GTAGAATTAA GTAAAGTAAG GAGCACTGCG
GTAAGGCTTC TATCAAACAT GGCGACCACA GGATCAAGTC ACCCTCACTA CACTTAG
|
|---|
| Protein sequence | MSWKELRDPI HGWIRLSIDE ARLLDDDVFV QRLRRITQDG LAHYVYPSAR GSRFEHSLGT
MYLATLMVER VLSEANEQSL RSLMDALGLH DEGVSAIRQY VRLSGLHHDI GHPPLSHVLD
GYVSSLVKPN QVLYTAGLGK EHEVAGLMIM GSGKFRRIIS SLGIDAGILR VITFYRLIKR
VRLITQYGSV NLEASIPEVK LLSNMSDDET MLLESLASIV SGGIDADRLD YTLRDLYFTG
AGSGSGAIDI ARLVNYLHLG RGILIFDDKA KAFLEGYAIA RYNLYKWVYM HHKVLQYDEM
LREVFRSIIM LEKAKGFKTA AINFLNGNPN EDDLDIYTDD YLEAMLSEAY HEGLINGYVK
DYADSILHRR TSMRALWKRD EDYIMIFGLG NAIMLNKYID EQVGVHGLNW VNEFKTRVVN
EMKETLNCDC KILVSTASFS NDISTFVRSN DGSLITITEV SPLIKAIDNA WEQTPHVFVF
IDPSELSKNG VELSKVRSTA VRLLSNMATT GSSHPHYT
|
|---|
| |