Gene Cmaq_0855 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCmaq_0855 
Symbol 
ID5709248 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaldivirga maquilingensis IC-167 
KingdomArchaea 
Replicon accessionNC_009954 
Strand
Start bp900583 
End bp901122 
Gene Length540 bp 
Protein Length179 aa 
Translation table11 
GC content45% 
IMG OID641275358 
ProductNUDIX hydrolase 
Protein accessionYP_001540680 
Protein GI159041428 
COG category[L] Replication, recombination and repair
[R] General function prediction only 
COG ID[COG0494] NTP pyrophosphohydrolases including oxidative damage repair enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones49 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCTCTA GCATACTTAA GCCAAGTAAT GGGGAAGCAT GGGCGGCGGT TGCTGTAATA 
TTGAAGGAGT GCCCAGACGC CATGGTACTG GTGGGTAAGA GAGTTATGAA TCCAAGGGAT
CCATGGAGCG GGGACGCTGC CTTACCTGGT GGGCATTATG AGACTAGTGA TGGGGATTTA
CTTAACACTG CGATTAGGGA AACCATGGAG GAGACGGGGA TAGATTTAAG GAAGGTAGGT
AGAGTGGTGA CTGTACTTAA TGTTGAGCAC CCAAGGAATA TGCCTAACCT TAACGTCTTA
CCCATAGTGT TTAAGGTTGA CTGCAATGTT GATGTAGTTA ACACGGCTAG TGGTGAATTC
GAGTACCTTA AGTGGATTAA GTTAAGTGAA TTACCTAACG CAGACAAGGT TACTGTGGTT
AAGGGTAACG CCAGAAAGGC CATAATTCTA GGGGACATGA TTATATGGGG TATGACTAGG
AGAATACTGT GTAGGCTCTA CAACATGTAT AAGGGAGAGG GGAATACTAT GAGGAATTAG
 
Protein sequence
MASSILKPSN GEAWAAVAVI LKECPDAMVL VGKRVMNPRD PWSGDAALPG GHYETSDGDL 
LNTAIRETME ETGIDLRKVG RVVTVLNVEH PRNMPNLNVL PIVFKVDCNV DVVNTASGEF
EYLKWIKLSE LPNADKVTVV KGNARKAIIL GDMIIWGMTR RILCRLYNMY KGEGNTMRN