Gene Cmaq_0848 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCmaq_0848 
Symbol 
ID5709536 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaldivirga maquilingensis IC-167 
KingdomArchaea 
Replicon accessionNC_009954 
Strand
Start bp892228 
End bp893541 
Gene Length1314 bp 
Protein Length437 aa 
Translation table11 
GC content43% 
IMG OID641275351 
Producthypothetical protein 
Protein accessionYP_001540673 
Protein GI159041421 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.420421 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones52 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTATCGGT TAAAGTACTC CCATTTATCA ATACTCGTGG GATTAGTCTT AATCCTAAGT 
ATACCATTAA CCTTGGGTTA CTCAATGCCA ACAGTGCCTC AGTGTCCATT GAATTCCAGT
GTTGTCCTAA TGATTACTAC TCAGCCATTA TTACCATCAG GCAACATGAT TGTCTCATAT
GGTCCACCCG GTCCATGGAC CGTGGTTAAG TATGGTGACT TGGAGTATTT GCTTCAAATC
AATATGTGGA ATCTGGCCAG TATAGGTTAT GGTAATGAAA CCTTAACCTT CAATAACGCC
ACTGGGGAAA TATGCTTCAG CTCAATGATA GGGAATGTGA CTTTAATAAG CCCAAGTGGC
GGTGTTTGGG GTTACCCTGG CATATACCTT GTCGGTGTGT TTCCAGGTGG TCAAGTGAAT
ATACGTAATC CCCTGCTTCC ATTACCCTTA ACAGTCAATG ATTTAGTTAA TGGATCATAC
TCCAATAGGT TAATAGCGTT GAACTACTCC ATGTGGATTC CTGATGATGA GCCAATGGAT
TGGTCGTACG ACATCTGGTT AACCACATCA CCAGCACCAT CAGCTAGCTT AAACCATGGT
GCTGAGTTAA TGATTTGGCT ATACACTACG ACGCCTGTGT TCTCATGGGC TGACACTGGG
ATTAAGGTTA ATATTCCTGT TACTGTTAAT GGTTCGCTTA TTAATGAAAC ATTTGATATT
CATGTTGACT GTTACCATGG TTATGATAGC ACCTACTGGA CCTACATAGC CTTCGTCCCC
CTTAATGGTG GCTTTAAGAA TGGTTACGTA AGCATATCAC TTAAACCATT CCTACAGTAC
ATGGTTAAGG TTTTTCCAGA AATCTGCCCA AGCCTCTGGT CCTCTCAGGG TGAGGTGAGT
AAACTATGGA TGGATGTAAT AACCTTAGGC AGTGAATACG GTAATAACCA ATGGGTTAAC
TACCCTGGAT GGGGTGTAAT AGCCTGGAGA CTTTATGAGG CATCAGTGTT AATACCCGGC
CTTACACAAG CCACCAGTAC CACTACTACA ACAACCACAG TAACTGCAAC GGTAACTACA
ACCGTTACTT CACCCACTCT AGTTACTTCA ACATCACTGG TAACCGAGAC CTCTACATTA
ATTGAAACCA CTTCATCCAC AACAACACTG GTTACTACGT TAACCAAGTT AACCACAGTA
ACATCAACGG TAACTATCAT TAGGCAGGCC ATTAATGAGG CTGTGGTATG GGTGGTCCTG
GTGATAGTAA TAGTGGTGGC TGTGGCTTTA GTGGCTGTGA GGAGAATATT ATAA
 
Protein sequence
MYRLKYSHLS ILVGLVLILS IPLTLGYSMP TVPQCPLNSS VVLMITTQPL LPSGNMIVSY 
GPPGPWTVVK YGDLEYLLQI NMWNLASIGY GNETLTFNNA TGEICFSSMI GNVTLISPSG
GVWGYPGIYL VGVFPGGQVN IRNPLLPLPL TVNDLVNGSY SNRLIALNYS MWIPDDEPMD
WSYDIWLTTS PAPSASLNHG AELMIWLYTT TPVFSWADTG IKVNIPVTVN GSLINETFDI
HVDCYHGYDS TYWTYIAFVP LNGGFKNGYV SISLKPFLQY MVKVFPEICP SLWSSQGEVS
KLWMDVITLG SEYGNNQWVN YPGWGVIAWR LYEASVLIPG LTQATSTTTT TTTVTATVTT
TVTSPTLVTS TSLVTETSTL IETTSSTTTL VTTLTKLTTV TSTVTIIRQA INEAVVWVVL
VIVIVVAVAL VAVRRIL