Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cmaq_0848 |
Symbol | |
ID | 5709536 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Caldivirga maquilingensis IC-167 |
Kingdom | Archaea |
Replicon accession | NC_009954 |
Strand | + |
Start bp | 892228 |
End bp | 893541 |
Gene Length | 1314 bp |
Protein Length | 437 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 641275351 |
Product | hypothetical protein |
Protein accession | YP_001540673 |
Protein GI | 159041421 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.420421 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 52 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTATCGGT TAAAGTACTC CCATTTATCA ATACTCGTGG GATTAGTCTT AATCCTAAGT ATACCATTAA CCTTGGGTTA CTCAATGCCA ACAGTGCCTC AGTGTCCATT GAATTCCAGT GTTGTCCTAA TGATTACTAC TCAGCCATTA TTACCATCAG GCAACATGAT TGTCTCATAT GGTCCACCCG GTCCATGGAC CGTGGTTAAG TATGGTGACT TGGAGTATTT GCTTCAAATC AATATGTGGA ATCTGGCCAG TATAGGTTAT GGTAATGAAA CCTTAACCTT CAATAACGCC ACTGGGGAAA TATGCTTCAG CTCAATGATA GGGAATGTGA CTTTAATAAG CCCAAGTGGC GGTGTTTGGG GTTACCCTGG CATATACCTT GTCGGTGTGT TTCCAGGTGG TCAAGTGAAT ATACGTAATC CCCTGCTTCC ATTACCCTTA ACAGTCAATG ATTTAGTTAA TGGATCATAC TCCAATAGGT TAATAGCGTT GAACTACTCC ATGTGGATTC CTGATGATGA GCCAATGGAT TGGTCGTACG ACATCTGGTT AACCACATCA CCAGCACCAT CAGCTAGCTT AAACCATGGT GCTGAGTTAA TGATTTGGCT ATACACTACG ACGCCTGTGT TCTCATGGGC TGACACTGGG ATTAAGGTTA ATATTCCTGT TACTGTTAAT GGTTCGCTTA TTAATGAAAC ATTTGATATT CATGTTGACT GTTACCATGG TTATGATAGC ACCTACTGGA CCTACATAGC CTTCGTCCCC CTTAATGGTG GCTTTAAGAA TGGTTACGTA AGCATATCAC TTAAACCATT CCTACAGTAC ATGGTTAAGG TTTTTCCAGA AATCTGCCCA AGCCTCTGGT CCTCTCAGGG TGAGGTGAGT AAACTATGGA TGGATGTAAT AACCTTAGGC AGTGAATACG GTAATAACCA ATGGGTTAAC TACCCTGGAT GGGGTGTAAT AGCCTGGAGA CTTTATGAGG CATCAGTGTT AATACCCGGC CTTACACAAG CCACCAGTAC CACTACTACA ACAACCACAG TAACTGCAAC GGTAACTACA ACCGTTACTT CACCCACTCT AGTTACTTCA ACATCACTGG TAACCGAGAC CTCTACATTA ATTGAAACCA CTTCATCCAC AACAACACTG GTTACTACGT TAACCAAGTT AACCACAGTA ACATCAACGG TAACTATCAT TAGGCAGGCC ATTAATGAGG CTGTGGTATG GGTGGTCCTG GTGATAGTAA TAGTGGTGGC TGTGGCTTTA GTGGCTGTGA GGAGAATATT ATAA
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Protein sequence | MYRLKYSHLS ILVGLVLILS IPLTLGYSMP TVPQCPLNSS VVLMITTQPL LPSGNMIVSY GPPGPWTVVK YGDLEYLLQI NMWNLASIGY GNETLTFNNA TGEICFSSMI GNVTLISPSG GVWGYPGIYL VGVFPGGQVN IRNPLLPLPL TVNDLVNGSY SNRLIALNYS MWIPDDEPMD WSYDIWLTTS PAPSASLNHG AELMIWLYTT TPVFSWADTG IKVNIPVTVN GSLINETFDI HVDCYHGYDS TYWTYIAFVP LNGGFKNGYV SISLKPFLQY MVKVFPEICP SLWSSQGEVS KLWMDVITLG SEYGNNQWVN YPGWGVIAWR LYEASVLIPG LTQATSTTTT TTTVTATVTT TVTSPTLVTS TSLVTETSTL IETTSSTTTL VTTLTKLTTV TSTVTIIRQA INEAVVWVVL VIVIVVAVAL VAVRRIL
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