Gene Cmaq_0823 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCmaq_0823 
Symbol 
ID5710275 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaldivirga maquilingensis IC-167 
KingdomArchaea 
Replicon accessionNC_009954 
Strand
Start bp865613 
End bp866581 
Gene Length969 bp 
Protein Length322 aa 
Translation table11 
GC content43% 
IMG OID641275326 
Productmembrane protein-like protein 
Protein accessionYP_001540648 
Protein GI159041396 
COG category[S] Function unknown 
COG ID[COG4920] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones49 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTTACA CAATGACATC TAAGCCTATG ACGTATGTGC TTTGGGTAGC TACCCCAGTT 
GCCTTTGCGG CATTCTTCGC ATGGGGGCAG GTTATTAAGA ATTACTGGAT GCCAATAGGC
TTATTCATAG CATACTTCAT ACTAATATTC GGTATATCAG CTTATGCTGG CTATAAGTCA
TACTCAAGGA ATAGGAGGGA GGGTGAACAG TATAGGAGGA GACAGGCCTT AAGTAGGTTA
ACTGGTGATG ATATTAAGAA GGCCATGGAG AGGGATTATG AGTTACCTAA GGAGTACTCA
GCTTTAAGTA AGAAGATGTT CCTTAACCTA GGCATAATGA TAGTTCTACT GATTGCTGTA
CTACTGGTTT ACTCAACCTT ATTCAATAAG ATAGCTGAAG TCATATCAGC ATTACTGGGC
AGTACATCAA TGGCTCAGTC AACGGTGGAG TTCCTGAGAT ACTTCATAAC CTACCTAATA
ATGTTTGGGA TATGGTTCGC CGTCTTCTAT GTTGTAGCTA GGTATACTGG TTTACCGTAC
CTAAGCCAAA ACACCTCAAT GATGCAGAAC ATGCCTTACA TACCCACTAA GAGCATTACC
TTCTATAAGG ATGCAGTAAT ATTTGATGAC CTTTACGTAC TCAAGGCACC CTTAGATGCG
GATAGCGTAA TGGTTGATGA GAAGAGGAGG TTCGTGGAGA TTGTTCTTAA GAAGCCAATG
AGTAATTTAC CATACCGTAG GCTCAGAATA TACACCAGGG ATCCCAGGGG TGTTTGGGAG
AAGTACGTAA GTAAGTACCT TGAGACACAG GTGAAGGTTG AGGAGGTTAA ACGCCCTGAA
CCTGAACCTG AAAAGCCAAG GGAATACAGG TGCCCGTACT GTGGTGCATT ATTAAGCGAG
GATTGGGAGT ACTGCCCTAA ATGCGGTAGA AAGATTCCAT GGGATGAGTT AAGGAAGGCG
TATGAATAA
 
Protein sequence
MSYTMTSKPM TYVLWVATPV AFAAFFAWGQ VIKNYWMPIG LFIAYFILIF GISAYAGYKS 
YSRNRREGEQ YRRRQALSRL TGDDIKKAME RDYELPKEYS ALSKKMFLNL GIMIVLLIAV
LLVYSTLFNK IAEVISALLG STSMAQSTVE FLRYFITYLI MFGIWFAVFY VVARYTGLPY
LSQNTSMMQN MPYIPTKSIT FYKDAVIFDD LYVLKAPLDA DSVMVDEKRR FVEIVLKKPM
SNLPYRRLRI YTRDPRGVWE KYVSKYLETQ VKVEEVKRPE PEPEKPREYR CPYCGALLSE
DWEYCPKCGR KIPWDELRKA YE