Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cmaq_0823 |
Symbol | |
ID | 5710275 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Caldivirga maquilingensis IC-167 |
Kingdom | Archaea |
Replicon accession | NC_009954 |
Strand | - |
Start bp | 865613 |
End bp | 866581 |
Gene Length | 969 bp |
Protein Length | 322 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 641275326 |
Product | membrane protein-like protein |
Protein accession | YP_001540648 |
Protein GI | 159041396 |
COG category | [S] Function unknown |
COG ID | [COG4920] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 49 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTTACA CAATGACATC TAAGCCTATG ACGTATGTGC TTTGGGTAGC TACCCCAGTT GCCTTTGCGG CATTCTTCGC ATGGGGGCAG GTTATTAAGA ATTACTGGAT GCCAATAGGC TTATTCATAG CATACTTCAT ACTAATATTC GGTATATCAG CTTATGCTGG CTATAAGTCA TACTCAAGGA ATAGGAGGGA GGGTGAACAG TATAGGAGGA GACAGGCCTT AAGTAGGTTA ACTGGTGATG ATATTAAGAA GGCCATGGAG AGGGATTATG AGTTACCTAA GGAGTACTCA GCTTTAAGTA AGAAGATGTT CCTTAACCTA GGCATAATGA TAGTTCTACT GATTGCTGTA CTACTGGTTT ACTCAACCTT ATTCAATAAG ATAGCTGAAG TCATATCAGC ATTACTGGGC AGTACATCAA TGGCTCAGTC AACGGTGGAG TTCCTGAGAT ACTTCATAAC CTACCTAATA ATGTTTGGGA TATGGTTCGC CGTCTTCTAT GTTGTAGCTA GGTATACTGG TTTACCGTAC CTAAGCCAAA ACACCTCAAT GATGCAGAAC ATGCCTTACA TACCCACTAA GAGCATTACC TTCTATAAGG ATGCAGTAAT ATTTGATGAC CTTTACGTAC TCAAGGCACC CTTAGATGCG GATAGCGTAA TGGTTGATGA GAAGAGGAGG TTCGTGGAGA TTGTTCTTAA GAAGCCAATG AGTAATTTAC CATACCGTAG GCTCAGAATA TACACCAGGG ATCCCAGGGG TGTTTGGGAG AAGTACGTAA GTAAGTACCT TGAGACACAG GTGAAGGTTG AGGAGGTTAA ACGCCCTGAA CCTGAACCTG AAAAGCCAAG GGAATACAGG TGCCCGTACT GTGGTGCATT ATTAAGCGAG GATTGGGAGT ACTGCCCTAA ATGCGGTAGA AAGATTCCAT GGGATGAGTT AAGGAAGGCG TATGAATAA
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Protein sequence | MSYTMTSKPM TYVLWVATPV AFAAFFAWGQ VIKNYWMPIG LFIAYFILIF GISAYAGYKS YSRNRREGEQ YRRRQALSRL TGDDIKKAME RDYELPKEYS ALSKKMFLNL GIMIVLLIAV LLVYSTLFNK IAEVISALLG STSMAQSTVE FLRYFITYLI MFGIWFAVFY VVARYTGLPY LSQNTSMMQN MPYIPTKSIT FYKDAVIFDD LYVLKAPLDA DSVMVDEKRR FVEIVLKKPM SNLPYRRLRI YTRDPRGVWE KYVSKYLETQ VKVEEVKRPE PEPEKPREYR CPYCGALLSE DWEYCPKCGR KIPWDELRKA YE
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