| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cmaq_0822 |
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| Symbol | |
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| ID | 5710274 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Caldivirga maquilingensis IC-167 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009954 |
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| Strand | - |
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| Start bp | 862906 |
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| End bp | 865566 |
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| Gene Length | 2661 bp |
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| Protein Length | 886 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 641275325 |
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| Product | helicase domain-containing protein |
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| Protein accession | YP_001540647 |
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| Protein GI | 159041395 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG1061] DNA or RNA helicases of superfamily II |
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| TIGRFAM ID | [TIGR01443] intein C-terminal splicing region
[TIGR01445] intein N-terminal splicing region |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 48 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGTGGAGT TTAAGGTTAA TGTTAATGGT GTATTAATTA AGAGGCAATG GAACTGGGGG
ACTGTAGTCA AGGTTAAGGA TGAGTTGAAG AGAATGGGGT TTAAGTGGAA TCCCAGTGAT
ACAACCTGGG TGGGTAAATT AAGTAGGATT AATGACGTTG AGAAGCTTAG GGAGCTACTT
AGGTTAAGCG CCAGTGAGTA TGAGTTAATT GTTAAGCCAT TACTTAAGGC ATCAATTAAG
GTTCCTAAGG TTCCGGAGGA GTTTAAGCAG TGTGCAATGG GTAATAGGGT TAATGTACCA
TGTGTTGCTA AACTCATAAT GGAGGATGAA TACGTTGAGG CTGAGTCATT CGAGGATTAC
GTTACTAAGC TTGTGGGTAA GGCGATGGAG AAACTAGGGG TTAAGAGTGA TGATGCCGTT
GAGGAGGCCG TGAAAATACT CCTGAATGAT CATTCCCTAA GGGAGACTTA CGGTAGGAGA
ATTGAATGGA GACTTGCCAT TGTTGATAAC GGTAAGGTGA CGTTAAACTT CCTAGCCAAG
GGACTACTTA AGAGCCTTAG GGAGATTAGA ATACCTTACA ATACTGTTGA TAAGCAAGGT
AACTTGAATA GGTATGAAAT ACCAGTTATA GGTAGGGATG ATGTGTATAG GGATGGTGAT
AAATGGATTA TTAGGTTCCC TGTATTTGAA AAGCAAACCA TAGAGTCATT ACTGAGGAAA
CTGGGCTACG TTATTAAGGA AGTTGAGTGG AAACCTAGAT CAATCCCAGT GCCTAAGGAT
AATGTTAATC TACTGGATTT CCAAAGGAAT GCATTAGAGG CGTGGGTTAA GAATGGTTAT
AAGGGAACAG TGGTCATCCC AACAGGTGGT GGTAAAACAT TCATCGCATT AAAGGCCATT
GCAACAGTTA AAGTACCTAC AATAATACTA GTGGTTACGG AGGAATTAAT GAATCAGTGG
CATGATAGAA TCAGAAGGAT GCTGGGTATT GAGGCAGGTA GGCTTGGTGG TGGGTTTAAT
GAAATCAAGG ATGTGACCGT AGCCATATAT AATTCAGCGG TTAAGTACAT AGGTGACATT
AGGGATAGAT TCGACTTAGC AATCTTCGAT GAGTGTTTAC CATATGATGC ATTAGTTATT
ACGGATAAGG GATTAATACC CATAGGGGAG ATTGTGGAGA AGAGATTACC CGTTAAGGTT
CTTACGCATA AAGGACGCTT CATGCGTATT ACTAATTACT TCAAAATACC CTTAGTTAAG
AGACTAGTAA GGATTACGCA TGAGAAAGGC GAATTAACGG TAACGGAAGA CCATCTAATC
CTTACACAGA ATGGGTGGAA ACCAGCAATA GAATTAAGGA ACGGAGACTT ACTATACTTC
TACAATACGC AGGCGCCACA GGGTAGAATT CAAAGCGGCT TAAATCTCAG GGAACCATTA
TACGGTAAGC AACCTAAACC TATGAATAAT GAACCCACTA AAGTAGCAAC TACCCTTGGA
GATGATGACA TTATTAAAGA TAGTGGACAA GGATTACTGC TTATTAATTC CATGGGAAAT
AAGAGGTATG AAGCTAAGCA TGATTCATAC TTTACCCCAG TGAGAGTACT TAGTGTGAAC
GTTCTTGTAG ATAAAGATCA TGATAATGCG ATACGGCAAT CACTACCTTC TCCGTATGCT
GAACATGAAG TTGATGAGGG GATTCCTAAG ATTAATCCAG TCACCGGCAT TAGAGGTATT
TTAGGAGGGG TAGGGGTTGT TTATGATATT GAGGTGGAGG AGGATCATAG TTTCATAGCT
GATGGTGTGG TTGTTCATAA TTGCCATCAT GTGCCTGCTG AGACTTTTAA GAACGTTGCA
TTCAAGTTGA CTGCACCCTA TAGGTTAGCC TTATCAGCAA CACCAACTAG GAAGGATGGT
AACGAGGAAT TAATATACCT AACCAGTGGT GGTGTGGTGC ATAAGGCGAC TTACCTAGAC
ATGGTTCATG CTGGTCTCGT TGTCCCAATA AGGCACTTCA GGATTTACGT TAAGTTAAGT
GAGGATGAGG TTAAGGAGTA TAGGTCAATT GGGGAGGATA ACGCCATAAT GCTTAGGAAC
ACTGCGGCTC AGGCTAAGGC TAAGATTCCA GTGACTGTTC AATTAACTAA ACTGGAGTAT
TCACTGGGAA GTAAGGTAAT AGTGTTTACA CAGTATATTG AGCAGGCTGA GGAGATTTAC
GAGGAATTGA AGAAGGAGCT TGGGGTTAAG GTAGCGTTAA TAACATCTAA GACCAGTAAT
AGGGATGATA TATTTGAGAG ATTCAGGTTA GGTAATGTTA AGGTCCTGGT TACTACAACA
GTGTTGGATG AGGGTATTGA TGTGCCTGAT GCTGATGTAG CCGTAGTGGT TTCAGGAACA
GGTTCACCTA GGCAAATGAT TCAGAGGGTT GGGCGTGTGG TTAGGCAGAC TGAGGGTAAA
GTTGAGGCTA GGGTCTATGA AATAATTGCT AGAAACACCA TTGAGGAGGC CTTAAGTAAT
GAGAGGCACC CGGATGATGA AGTCTACGAG AAGGAGTGTA GGAAGTATGA TGAGAAGGAC
CTAAGTCTAC TCCTAAATAG GGTTAAGGCA ATAGTTAGTA AACTTAAGGA GCAGGGTAGC
ATGCTTAAGT ATGTTAAATG A
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| Protein sequence | MVEFKVNVNG VLIKRQWNWG TVVKVKDELK RMGFKWNPSD TTWVGKLSRI NDVEKLRELL
RLSASEYELI VKPLLKASIK VPKVPEEFKQ CAMGNRVNVP CVAKLIMEDE YVEAESFEDY
VTKLVGKAME KLGVKSDDAV EEAVKILLND HSLRETYGRR IEWRLAIVDN GKVTLNFLAK
GLLKSLREIR IPYNTVDKQG NLNRYEIPVI GRDDVYRDGD KWIIRFPVFE KQTIESLLRK
LGYVIKEVEW KPRSIPVPKD NVNLLDFQRN ALEAWVKNGY KGTVVIPTGG GKTFIALKAI
ATVKVPTIIL VVTEELMNQW HDRIRRMLGI EAGRLGGGFN EIKDVTVAIY NSAVKYIGDI
RDRFDLAIFD ECLPYDALVI TDKGLIPIGE IVEKRLPVKV LTHKGRFMRI TNYFKIPLVK
RLVRITHEKG ELTVTEDHLI LTQNGWKPAI ELRNGDLLYF YNTQAPQGRI QSGLNLREPL
YGKQPKPMNN EPTKVATTLG DDDIIKDSGQ GLLLINSMGN KRYEAKHDSY FTPVRVLSVN
VLVDKDHDNA IRQSLPSPYA EHEVDEGIPK INPVTGIRGI LGGVGVVYDI EVEEDHSFIA
DGVVVHNCHH VPAETFKNVA FKLTAPYRLA LSATPTRKDG NEELIYLTSG GVVHKATYLD
MVHAGLVVPI RHFRIYVKLS EDEVKEYRSI GEDNAIMLRN TAAQAKAKIP VTVQLTKLEY
SLGSKVIVFT QYIEQAEEIY EELKKELGVK VALITSKTSN RDDIFERFRL GNVKVLVTTT
VLDEGIDVPD ADVAVVVSGT GSPRQMIQRV GRVVRQTEGK VEARVYEIIA RNTIEEALSN
ERHPDDEVYE KECRKYDEKD LSLLLNRVKA IVSKLKEQGS MLKYVK
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