Gene Cmaq_0816 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCmaq_0816 
Symbol 
ID5708607 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaldivirga maquilingensis IC-167 
KingdomArchaea 
Replicon accessionNC_009954 
Strand
Start bp855296 
End bp856633 
Gene Length1338 bp 
Protein Length445 aa 
Translation table11 
GC content44% 
IMG OID641275319 
Producthydroxypyruvate reductase 
Protein accessionYP_001540641 
Protein GI159041389 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2379] Putative glycerate kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGGCTA ACGATTCCAG TGAACTTAGG GATCTTGCAC TTAGGTTAGT TAATCAAGCT 
CTTACTGCCT CAGATCCGGC ACCAGTGGTT AGGAATTGTG TTAGACAGGT AGGTAGTAGT
ATTAATGTTT GCGGTAGGGA ATTTAACGTG AGGGATATTG CTGTGGTTGC TATTGGTAAA
GCCGCCCCAA GGCTTATTGA TGGTGCATTA TCCTCAGTGA ATGCAACCAG GGCATTAGCA
GTAATACCTA GGGATTGGGT AAAGCCTAAG TCGAGTAATG TTGAGGTTAT TGAATCAACA
CACCCATTAC CAAGTGATTT AAGCATTAAG GCCGCTGAGG AGATTATTGA ATTATCCAGA
ACCTTAAGTA GAGGTGACTT AGCCTTAATC CTCATTAGCG GTGGTGGAAG CGCATTAGTT
GAATTACCTA GGCCACCATT AACCATTGAT GATTTAGTTG AGTTAAATAG GTTAATGCTT
AATTCGGGAA TGAGCATCAG TGAGATTAAC ACTGTACGTA AGCACGTATC AATGATTAAG
GGTGGTCAAT TAGCCCAATA CTTCATTAAG AGGGGTGTTA GGGTTGTTGG ATTATATGTT
AGTGATGTAC CTGGTGATGA TCCATCACTA ATAGCAAGCG GCCCAACGGT CCCAGATAAG
TCAAGCTTCA GTGACGCCGT AAGCATTCTT AAGGCAAGGG GTATTTGGGG TAGTTTACCG
GATAAGGTTA AGGTTTTACT TGAAAATGGG GTAAGGGGTA GTATTCCAGA AACCCCAAAG
AGGCTTAAGG CTATGAATAA GGTAATATTA ACTAACCTTA ATGTACTTAA GAGCCTAAGG
TTAAGGCTCA GTGAACTTGG CGTTAAGTCA ATCATATTAA CATCCAGGCT TGAGGGTGAA
GCCCGTGAGG TTGGGAAGGC ATTAGCCTCA ATCACCCTTG ACTCCTTAAG GAGAGGCTTA
CTGCTTAAGA GGGGTGTAGT GTTGGCTGGT GGTGAACCTA CCGTTACCGT TAGGGGTAAT
GGTAGGGGTG GTAGAACAAT GGAGCTTGCA GCAGCCTTCG CTAAGTCAGT GAGTGGGCAT
GGTTCAGTGG CTTTACTGGC CTTAGCCACG GATGGTATTG ATGGTAATAC CGATGCCGCA
GGTGCATACG CCGACTACAC CACTGAATCA AGGGCGATGA GTATTGGTTT AAGCATAGAT
GATGCCTTAA GTAGAAACGA TACGTACACT CTATTTAAGG CATTAAATGA CACCATTATA
ACAGGCCCAA CGGGGACTCA GGTTAACACA ATTATAGCCA TGCTAATTAA CGCTAAGATC
ACTCACCAAG TCCAGTAA
 
Protein sequence
MQANDSSELR DLALRLVNQA LTASDPAPVV RNCVRQVGSS INVCGREFNV RDIAVVAIGK 
AAPRLIDGAL SSVNATRALA VIPRDWVKPK SSNVEVIEST HPLPSDLSIK AAEEIIELSR
TLSRGDLALI LISGGGSALV ELPRPPLTID DLVELNRLML NSGMSISEIN TVRKHVSMIK
GGQLAQYFIK RGVRVVGLYV SDVPGDDPSL IASGPTVPDK SSFSDAVSIL KARGIWGSLP
DKVKVLLENG VRGSIPETPK RLKAMNKVIL TNLNVLKSLR LRLSELGVKS IILTSRLEGE
AREVGKALAS ITLDSLRRGL LLKRGVVLAG GEPTVTVRGN GRGGRTMELA AAFAKSVSGH
GSVALLALAT DGIDGNTDAA GAYADYTTES RAMSIGLSID DALSRNDTYT LFKALNDTII
TGPTGTQVNT IIAMLINAKI THQVQ