Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cmaq_0783 |
Symbol | |
ID | 5708509 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Caldivirga maquilingensis IC-167 |
Kingdom | Archaea |
Replicon accession | NC_009954 |
Strand | - |
Start bp | 817905 |
End bp | 818843 |
Gene Length | 939 bp |
Protein Length | 312 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 641275286 |
Product | methylisocitrate lyase |
Protein accession | YP_001540608 |
Protein GI | 159041356 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2513] PEP phosphonomutase and related enzymes |
TIGRFAM ID | [TIGR02317] methylisocitrate lyase |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 0.649003 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACCTG TACTACTTGA TAAGGGTAAG CCTAAGCCAA GTGAGATTAG GGGGAGGTTT AGGGAGAGAC TGGGTAAGGA TGGTATAATA GTGGCTCCTG GTGTTTTCAT TCCAGCTGCA GCAATGTTAG CTGAGGAATT GGGGTTTGAG GCTGTTTACT TCAGTGGCGC CGCGTACTCC AATATGCTTG GTTTACCTGA TCTAGGCGTC TTCACGCTTA GTGAATTATC ATACTACCTG AGGTTCTTTA CAAATGCAGT AAGCATACCC CTTATCGTTG ATATTGACAC AGGCTTTGGG GAGGCATTAA ATGTTGCAAG GACCATTAGG GAGCTTGAGG ATGTTGGCGT ATCCGCAGTT CATATTGAGG ATCAGGAAAT GCCTAAGAAG TGCGGGCACT TAGCAGGTAA GAGGGTTATA CCCATTGATG AAATGGTTAA GAAGATTAAG GCTGCAGTTG AGGCTAGGAG GGATGATAAC TTCATTATAA TAGCTAGGAC TGATGCTAGG GATGTTGAGG GCTTTGATTC AGCAGTGGAG AGGGCTAAGG TTTACCTTGA AGCTGGCGCT GATGCAATAT TCCCTGAGGC ACTCCACAGT AAGGAGGAGT TCATGGAGTT CGCCAGGAGG GTTAAGGCAC CACTGCTTGC TAATATGACT GAGTTTGGAA AGACACCGTA CATTACTGCG AAGGAGTTTG AGGAAATGGG TTATAAGATA GTTATATTCC CTGTAACAAC ATTCAGGTAC GCTATGGGTG CTATTAAAAG GGCGTTAATT ACCCTTAAGA ATGAGGGTAG TCAATTAAGC TTAATTAACG ATATGATGAG TAGGGAGGAT GTTTACCAAC TCATTGGATA CCATGATTAT GAGGAGTGGG ATAAGAATTT AGCTGAGGAG GCTAGTAAAC TATTAAGTGG TAGAATTAAG CTGAGGTAG
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Protein sequence | MKPVLLDKGK PKPSEIRGRF RERLGKDGII VAPGVFIPAA AMLAEELGFE AVYFSGAAYS NMLGLPDLGV FTLSELSYYL RFFTNAVSIP LIVDIDTGFG EALNVARTIR ELEDVGVSAV HIEDQEMPKK CGHLAGKRVI PIDEMVKKIK AAVEARRDDN FIIIARTDAR DVEGFDSAVE RAKVYLEAGA DAIFPEALHS KEEFMEFARR VKAPLLANMT EFGKTPYITA KEFEEMGYKI VIFPVTTFRY AMGAIKRALI TLKNEGSQLS LINDMMSRED VYQLIGYHDY EEWDKNLAEE ASKLLSGRIK LR
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