Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cmaq_0777 |
Symbol | |
ID | 5708533 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Caldivirga maquilingensis IC-167 |
Kingdom | Archaea |
Replicon accession | NC_009954 |
Strand | - |
Start bp | 809440 |
End bp | 811566 |
Gene Length | 2127 bp |
Protein Length | 708 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 641275280 |
Product | hypothetical protein |
Protein accession | YP_001540602 |
Protein GI | 159041350 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 41 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATGATTA AGTGGAATGA TTTAAGGCTT ACGGTACTTC ACGATGATGC AGCATGGGAG TTAATTCTTG GCGACTCACT GTTGCTTAGG GCTTCACCAC TGGTTAATGG TAAGTTACTT AGCCCCAAAG GGTATGAGTC GCATGAGAAC GTTGACTCAT TGGGTAAGTA TATAGTATAT TCAATTAGAG CAGAGCCTGG GGATTTAACA TTCTCGGTTA AGGCTTACTT AAACGACCCA ATTATAGTAT CAAGCATATT ATTCAATTCA AGTGTGAACA GGAGTGTTGG TAGGGAGGCT GATGTTGATA CAGCTTCATT TAATGCCCAT GTATTACTAG ATAGGGGGTT TGGTTATACG CCGTATAACT GGATTAGGCC TGTTTTCATA AGGGCTGGTG ATTTCAAGGA ACCCACGGTA TTGGGTTCCT TTGGAATGTT TATTAACTCC AGTGGACTTA ACACAATGCT GGTATCGGCC CTTGAGCCAA GGGCCCCTCA GCTCCTTAAA TTAAATCCAG GTTCCGTTGG GTTTAAGGCT ATCTTGGGCT TGAGCGGAAC CATTAGGGAA ATACCCAGTG GATTCAACCT CTCCTCAGTG GTGGTGTATG GCAAGTCACC TAATGAGGCA TTATCAAGGT GGGGACGTTG GATTAGAGGA TTTTACGGTA GAACTAAGAC ATCCATTGAA GTTAACCGGA ATTACCTGGA TTCACTTCAA TACTGGACAG ATACAGGTGG GATGTACTGG TATAGGACAT TACCTGGCAT GAATTATACT CAAACAATGC TTGAGATTAA GAGATACATG GATGAGAAAG GGATTGGCGT TAAGTATTAC CAAGTTGACT CATGGTGGTA CCCTAAGAGT ACTGAGGATG GTGGAGCATT GGAGTATAAG GAGGTTCCTG AATTGGGAAG CGACTTGGAT GCGTTATCTA AGGTACTTGG ACCAATAGTA AGCTTACACA TAAGGTATTT ATCCAAGAAT TCACCGTATG CTCAAAAATA CTCCTCAAGG CTTGTTAAGG ATGCAGCATG CCTACTGCAA CCTGAGGAGT TCTTCGATGA CCTATTCAAG GCGCTTAAGA GTAAGGGCAT TATGTCTGTT AAGCATGATT GGTTAACAAC GTTAAGGCAG AGGTGCAGTG AAGTGTACAT GAGTGAGGTT GGTGCCCTTG AGAGGTATAT TGATGCATTA TTCAATGCCG CGGGGAAGCA TGATTTACTT ATTGAATTAT GCATGCCTGA TATGTACCAC TACTTCATAG GCTTTAAGCA TAATAATGCA TTAATGATTA GAACAAGCCC GGATTACGGG TCATCACTAC CTAAGCATCT GCTACTCTAT TATAATGCAT ATGATTCGCA ATTAGCGATT CAACTGGGTT ACGCACCCTT CTTCGACGTC ATGGTGACAA CGGATCATCA CGCTTACGCT GACCTACTGG CCAGGATATT ATTCTTCTCC GCAATGGGTA TTGGTGACGC CATTGATAAG GACCCATACT GGAGGAGGGG TGTTAATGTT AATTTACTTA GGAGGTTCTT GACCCCGCAA TGGATTGTGC TTAGGCCTGA TGAGCCAGCT AAACTAGCTG ATGAAATGTT CCTAAATGAT CCATATACTG AACCAGTACC ATTAATCGCC TTAACCACTG TGAGGGATAT TACTGTGATC ACTTTATTTA ACGTACATAG GGATCTTGAC CAAGTATGCT ACACACTGGA ATCTGGTAAA TTGGGTTTAC CTAAGGACTC GGTCTTACTG AGGGTGAACA CTATGACTAC TCATGATGGT AAAGCGGAGG GATGTGTAAG GAAGGCTGAG CCCCACTTAA TCCTTGCATT CAATGATTCA AGTAAACCAA GGGTAATTGG GTTAACCAAG TACGCATTGA TGCCAGCCTC AGTAATCAGG ATTAATGAGG AGTACTCAAG GCCACTTTAT AAAGCCACCT TAACACTAGT TGAACCTGGT GAAATCCTCA TTTACTCACC CAGTAAGCCA ATTAGTGTTA AGGTTAATGG AACTCCAGTT AATTATGATT ATAATGAGTC AAGTAAACTA CTACTAGTTA ACATACAGTA CACTGAAGCA ACCCTGGAGT TAACCCTCCC CTCATAA
|
Protein sequence | MMIKWNDLRL TVLHDDAAWE LILGDSLLLR ASPLVNGKLL SPKGYESHEN VDSLGKYIVY SIRAEPGDLT FSVKAYLNDP IIVSSILFNS SVNRSVGREA DVDTASFNAH VLLDRGFGYT PYNWIRPVFI RAGDFKEPTV LGSFGMFINS SGLNTMLVSA LEPRAPQLLK LNPGSVGFKA ILGLSGTIRE IPSGFNLSSV VVYGKSPNEA LSRWGRWIRG FYGRTKTSIE VNRNYLDSLQ YWTDTGGMYW YRTLPGMNYT QTMLEIKRYM DEKGIGVKYY QVDSWWYPKS TEDGGALEYK EVPELGSDLD ALSKVLGPIV SLHIRYLSKN SPYAQKYSSR LVKDAACLLQ PEEFFDDLFK ALKSKGIMSV KHDWLTTLRQ RCSEVYMSEV GALERYIDAL FNAAGKHDLL IELCMPDMYH YFIGFKHNNA LMIRTSPDYG SSLPKHLLLY YNAYDSQLAI QLGYAPFFDV MVTTDHHAYA DLLARILFFS AMGIGDAIDK DPYWRRGVNV NLLRRFLTPQ WIVLRPDEPA KLADEMFLND PYTEPVPLIA LTTVRDITVI TLFNVHRDLD QVCYTLESGK LGLPKDSVLL RVNTMTTHDG KAEGCVRKAE PHLILAFNDS SKPRVIGLTK YALMPASVIR INEEYSRPLY KATLTLVEPG EILIYSPSKP ISVKVNGTPV NYDYNESSKL LLVNIQYTEA TLELTLPS
|
| |