| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cmaq_0768 |
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| Symbol | |
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| ID | 5708454 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Caldivirga maquilingensis IC-167 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009954 |
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| Strand | + |
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| Start bp | 800512 |
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| End bp | 801204 |
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| Gene Length | 693 bp |
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| Protein Length | 230 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 641275270 |
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| Product | sugar fermentation stimulation protein |
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| Protein accession | YP_001540593 |
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| Protein GI | 159041341 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1489] DNA-binding protein, stimulates sugar fermentation |
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| TIGRFAM ID | [TIGR00230] sugar fermentation stimulation protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.00010149 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATACTAGGCT TCACCATTAA TAAGCCTGAT GTTGAAGGCG TCTTCATTAA GAGGATTAAT
AGGTTCCTGG GCATTGGTCT AATCAATGGA GTTGAGTCCC TGGTTCATAT TCATGATCCA
GGGCGTTTAA AGGAATTACT TAAACCCGGC ATCAAGTTCT ACGCATACCA TAAAGACTCA
GGTAAGACTA GGTTCTACCT TACCGCAGTG GATTTGGGTA ATGAATTGGT TTTAATTAAT
TCAGCCATAC ACAATAATGT AGCCGCCTGG CTCATAGAGA ATGGCCTCAT TTTAAAGGGT
TACGAGGTCT TAAGAAGAGA ACCCAGGTTT AGTGGGGGTA GGTTTGATTT AATGCTTAAG
TCACCTAAGG GTGGTTACAC TATGGTTGAG GTTAAGGGGG TTACGCTGGA GGAGGATGGT
GTAGCCAAGT TCCCGGATGC ACCCACATTA CGTGGTGCAA GACATATGAT TAAGTTGGCT
AAAGCCATTG AGGAGGGTTA TGAAGCCTAC GTAATATTCC TAGTACTAAG ATCCAATGCA
CTATTATTCA CACCAAACGT AAGCCTCGAC CCCAGGTTCA GTAACGCATT GAAGTACGCC
ATTGAACATG GGGTTAAGGT ACTAGCCTAC AAGCTAGCGT TAACTAGGGA CTGGGTACTG
CTCCCCATGG GTCGAGTTAA TGTGATACTG TGA
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| Protein sequence | MLGFTINKPD VEGVFIKRIN RFLGIGLING VESLVHIHDP GRLKELLKPG IKFYAYHKDS
GKTRFYLTAV DLGNELVLIN SAIHNNVAAW LIENGLILKG YEVLRREPRF SGGRFDLMLK
SPKGGYTMVE VKGVTLEEDG VAKFPDAPTL RGARHMIKLA KAIEEGYEAY VIFLVLRSNA
LLFTPNVSLD PRFSNALKYA IEHGVKVLAY KLALTRDWVL LPMGRVNVIL
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