Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cmaq_0759 |
Symbol | |
ID | 5708969 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Caldivirga maquilingensis IC-167 |
Kingdom | Archaea |
Replicon accession | NC_009954 |
Strand | - |
Start bp | 789603 |
End bp | 790814 |
Gene Length | 1212 bp |
Protein Length | 403 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 641275261 |
Product | major facilitator transporter |
Protein accession | YP_001540585 |
Protein GI | 159041333 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 42 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTAATT TAAGGGAGAT TGATTATGGG CCATTAGGGA GGAGTAGGTT CTTCGCCATA ACATCAACGG CACTGGGCAT GTTCCTATGG GGTTTCATAC TGGCATTAGC CCCATTAACA ACGCAATGGC CCTTCGTACC AAGTAGTTTT GATGAGTACG TACTCTTAGC GGCGCCAGTA TCATTAATGG TTGGTAATTT AATCATCGGG AAATTATCTG ACGCCTTGGG TAGGAAGATG GGTTTCATAA TGACCATGGT TATTTACGGT GTTGGTGCAT TACTAATAAT ATTATCCAGT AACGTTTACG AATTAATAGC CGGCATAGCT CTAGCTGAAT TTGGTCTTGG TGGTGAGGAG CCTGCAACGT TAGCCTATAT GGCTGAAATG ATGCCCATTA GGTTGAGGGA GAGGATCATC ATAGGTGTTA CTAATGTGGC TAATATTGGT GCCGCGGTGG CGGCTGCATT GTCCCTTGTT GCTTCATCAA TGTACCTTCA GAAGCTGTTC TTTGGTGTAA CAATACTAGT CACCATAATT ATAATATTAG CCACTAGGCT GCTGATACCT GAATCATATA GGTGGAGTAA CGTGAAGTCG TCATGTAGGG TGATTGGGTT AAGTGAGATG AAGGGATTTA GGATTAGGTT AATATTCTTA ACACTCATAG CCTTAACAAT AGTGTTAACA TATGCATTAC TGGCTCTCGT AATGGGTCCT TACCTCTTTC CGAAATTAAC CTCATGGATC GTGCTACTGT ATAATGTTGG TGAATCAGTG GGTGGCTTAA TAGGCATGGC CTTAGCTGAT ATAATGGGTA TGAGGAAGTT CACCCTAATG GCCTACCTAG GTGGTTTCAT CACAATGCTA CTGGTTATAC CTCAATTAGC CTTTGCACCG CAAAACCTAC CACTATTCCT TCTAATACTA TCTGTTAACG GCGTATTTGG TGAACTGGGG TGGGCCGCTA GGGTTGTACT GGAGCCTGAG TTATTTCCAA CAGGCAGTAG ATCCATGGGT GTTGCCTTGG TTAGGGCAAT AGCCTACGTC GCCTACATAG CATCAATCTT CATAACAGCT GGTTTCACAA TATGGCAATA CGCATGGTAT AATGTCGCAC TATGGAGCCT TGGGCTATTA GGTGCATTGA TTTGGTTTAC CCATGGTGTT GAAACCAGGC TTAAGACCCT GGAGGAGGTT AATCCGCAGT GA
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Protein sequence | MSNLREIDYG PLGRSRFFAI TSTALGMFLW GFILALAPLT TQWPFVPSSF DEYVLLAAPV SLMVGNLIIG KLSDALGRKM GFIMTMVIYG VGALLIILSS NVYELIAGIA LAEFGLGGEE PATLAYMAEM MPIRLRERII IGVTNVANIG AAVAAALSLV ASSMYLQKLF FGVTILVTII IILATRLLIP ESYRWSNVKS SCRVIGLSEM KGFRIRLIFL TLIALTIVLT YALLALVMGP YLFPKLTSWI VLLYNVGESV GGLIGMALAD IMGMRKFTLM AYLGGFITML LVIPQLAFAP QNLPLFLLIL SVNGVFGELG WAARVVLEPE LFPTGSRSMG VALVRAIAYV AYIASIFITA GFTIWQYAWY NVALWSLGLL GALIWFTHGV ETRLKTLEEV NPQ
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