| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cmaq_0757 |
|---|
| Symbol | |
|---|
| ID | 5709034 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Caldivirga maquilingensis IC-167 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009954 |
|---|
| Strand | - |
|---|
| Start bp | 787584 |
|---|
| End bp | 788405 |
|---|
| Gene Length | 822 bp |
|---|
| Protein Length | 273 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 641275259 |
|---|
| Product | periplasmic binding protein |
|---|
| Protein accession | YP_001540583 |
|---|
| Protein GI | 159041331 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0614] ABC-type Fe3+-hydroxamate transport system, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 39 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGATTGATG GTGAGTTAAT GGGTGTGCCA CGTAGGGTAA TTAGCCTTAA TCCATCTGTA
ACAGAGTTCC TATTCCTACT TGGGGCTGGG GATAGGGTTG TGGGTGTTGA TGTGTGGAGT
TATAGGCCGC GTGAAGCCAT GAGGGTTATG AGGATTGGTT CATTTACGTC AGCTAACATT
GATTTGATTA AGAACTTAAA CCCAGACTTA ATAATACTAT CATATCCTGT TCAAAGGCAG
TTGGTTAACC AATTGAGGGC GCTGGCACCT GTATTGGCTA TACCTACCCC AGTTAACTTA
AACACTGCCC TAGGCTTCTT TGAGATGATT GGTGGTTTAC TTGATATGGA TGAGGAGGCC
TTGAGGCTGG TAGGTATTTA CCGTGATTTA ATGAGGCGTG AGGCTAATGT TGACGGCGTT
CTCGCAGTAT TCTCACTGGG TGATTACGTG GTGCCGTGTG AAGCTTCTTA CGTAGCCTCT
GCGCTTAATA GGGTTGGGTT GAATTACGTT AAGGGGTTTA AGTGCGTAAT GGTTTTAACT
AATAAGGATG GTTTAATCAA CCTGATTAAT CAACTTAACC CCAACCTAAT AATATACGAG
GGTAAGACTA AGACCTATAG ACCCCAGGAA CTTGACTTTG CGGCTAATAG ACGTGTATTA
TTCGTACCCA ATGACACGTT AGCCCACTTT GGGCCAAGCC TACCACTGGA TCTTAGGCTG
GTGAGTGAAG CCGTTAATAA TGGTAGATCA TTCGTGGAGG GCACATCCAG TGTTAATAGA
CCAAGCCTAA GTGATGAATG GTATAAACCA TACGTAACCT AG
|
|---|
| Protein sequence | MIDGELMGVP RRVISLNPSV TEFLFLLGAG DRVVGVDVWS YRPREAMRVM RIGSFTSANI
DLIKNLNPDL IILSYPVQRQ LVNQLRALAP VLAIPTPVNL NTALGFFEMI GGLLDMDEEA
LRLVGIYRDL MRREANVDGV LAVFSLGDYV VPCEASYVAS ALNRVGLNYV KGFKCVMVLT
NKDGLINLIN QLNPNLIIYE GKTKTYRPQE LDFAANRRVL FVPNDTLAHF GPSLPLDLRL
VSEAVNNGRS FVEGTSSVNR PSLSDEWYKP YVT
|
|---|
| |