| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cmaq_0746 |
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| Symbol | aspC |
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| ID | 5708814 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Caldivirga maquilingensis IC-167 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009954 |
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| Strand | + |
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| Start bp | 776910 |
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| End bp | 778202 |
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| Gene Length | 1293 bp |
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| Protein Length | 430 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641275248 |
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| Product | aspartyl-tRNA synthetase |
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| Protein accession | YP_001540572 |
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| Protein GI | 159041320 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0017] Aspartyl/asparaginyl-tRNA synthetases |
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| TIGRFAM ID | [TIGR00458] aspartyl-tRNA synthetase, archaeal type |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.24363 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGGCCATTT ACAGGAAGAC GCATTGGACC AGTGAAATTA AACCTGAACT GGATGGTAAA
GAGGTTACCT TATCTGGTTG GGTGTGGGAG ATTAGGGATG TGGGTAGGAT AAAGTTCATA
ATGCTGAGGG ATAGGGAAGG CATGGTTCAG GTTACGGTTA AGCGTTCATC AGTAAGCGAT
GAGACTTGGG ACACGGTCTC TAGGCTTTCC AAGGAGGATG TAGTAAGTGT TAGGGGTATT
GTTAGGGCTA GTAAGGTGGC TAAGACCGGC GTGGAGGTTG AGCCTATTGA AGTTAGGTTA
CTTAATAAGG CTAATCCACT TCCAATAGAT ATTTGGGGTA ATGTTGATGA AACTATGCTC
GACTTAAGAT TAAGGTATAG GACAGTTGAC CTTAAGCGCA GGAGCAATGT AATACTCTTC
AAGGCCTTAA GCGAGGTTGT TAAGGCAATG CGCACAACGC TTTACGGTTA TGGTTTCATA
GAGGTGTTTA CACCAAAGAT AATAGCCACA AGCACCGAGG GTGGTGCTGA ATTATTCCCT
GTACAGTACT TTGAACGCAC AGCCTACTTG GCTCAAAGCC CCCAGTTGTA TAAGGAGGAG
TTAACCGCCA GTTTAGAGAG GGTTTTTGAA ATTGGACCAG CCTATAGGGC TGAGAAGCAT
GATACAACAT ACCACGTTAA CGAATTCATA TCAGTTGACG CTGAGGCGGC ATTCATGAAT
TACAGGGATG TTATGAGCGT TCTCGAGGAT GTTATTGTGG AGTCCTATAG GGCTTCAGTG
GACTTACTGA GTCAAATAGG CAGGGAGGTG AGGGTGCCGT CTAAGCCCTT TAAGGTTATT
ACATACGATG ATGCGTTAAG CATGCTTGAT AAGGAGGGGA TTAAGGTTAA GTGGGGTGAT
GATGTGCCTA AGGAGGGGTT AGAGGCCTTA AGTAGGTTAA TTGGGGAGCC GTTCTTCATA
ATACACTTCC CAACAATGCT TAGGGCCTTT TACACAAAGC CTATTGAGGG TGATGAATCC
AGGAGCGAGT CCTTCGACCT AGTCATAGAT GGCATGGAGG TTACCTCAGG ATCCACCAGG
ATACATGATA AGGATGAACT TGAGAAGGCC ATGAGAGCCA GGGGCCTTAA CCCAGGTAAC
TTCTCAACCC ACCTGGAGAT TTACAGCTGG GGTATGCCTC CACACGCTGG TTGGGGTCTT
GGATTATACA GGCTAATGAT GGTTATGGCT GGTGTAAGGA ATATTAGGGA AGTGATATTA
TTCCCAAGGG ACAGGTATAG GTTAGTGCCT TAA
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| Protein sequence | MAIYRKTHWT SEIKPELDGK EVTLSGWVWE IRDVGRIKFI MLRDREGMVQ VTVKRSSVSD
ETWDTVSRLS KEDVVSVRGI VRASKVAKTG VEVEPIEVRL LNKANPLPID IWGNVDETML
DLRLRYRTVD LKRRSNVILF KALSEVVKAM RTTLYGYGFI EVFTPKIIAT STEGGAELFP
VQYFERTAYL AQSPQLYKEE LTASLERVFE IGPAYRAEKH DTTYHVNEFI SVDAEAAFMN
YRDVMSVLED VIVESYRASV DLLSQIGREV RVPSKPFKVI TYDDALSMLD KEGIKVKWGD
DVPKEGLEAL SRLIGEPFFI IHFPTMLRAF YTKPIEGDES RSESFDLVID GMEVTSGSTR
IHDKDELEKA MRARGLNPGN FSTHLEIYSW GMPPHAGWGL GLYRLMMVMA GVRNIREVIL
FPRDRYRLVP
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