Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cmaq_0737 |
Symbol | |
ID | 5708503 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Caldivirga maquilingensis IC-167 |
Kingdom | Archaea |
Replicon accession | NC_009954 |
Strand | - |
Start bp | 769456 |
End bp | 770172 |
Gene Length | 717 bp |
Protein Length | 238 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 641275239 |
Product | ABC transporter related |
Protein accession | YP_001540563 |
Protein GI | 159041311 |
COG category | [V] Defense mechanisms |
COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 39 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.0135458 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAAGTGCA TAGATGTTGA GGGCTTAGTG AAGTCCTTTA ATGGGGTAAG GGCCCTGGAT GGATTATCAT TCGGCGTGGA GTGTAGTGAT TCAGCAGCCC TCCTTGGGCC AAATGGGGCT GGTAAGACAA CCACAATGAG GATTATTGCA GGGCTCCTTA AACCAGACTC AGGAATAGTT AGGGTATGTG GTTTTAATAC TATTAAGGAA CCTAGGTTAA CTAAGGCCTG CCTAGGTTAC CTACCTGAGG ATGCTGCACC ATTCATGAAC TTAACGGTTA GGGAGAACCT AGAGTACGTG GGTTTAGTGA GGGGGTTAAG TAATGTTAAG GATGCTGTGG AGTGGGTTTC CCAAGCCCTA GGCTTAGATG GTTTAATGAA TGCTCAACCA GCATCATTAT CAAGGGGTAA TAGGCAGAGG GTTGCCTTAG CCATGGCTAT TATTCATAGG CCTAAGGTAC TCCTCCTTGA TGAACCCTTA AATTACCTTG ATATTCCAAC CCAGGAGAAC GTTATTGAAT TATTATTAAG CATGAGGAGG AACGGCACCA CTATGTTAAT ATCCACCCAC ATAATGACTG TTGCTGAGAG GTTAGCTAAT AGGGTAATCA TGATTAATAG GGGTAGATTA ATTTGGGAAG GCAGCATCAG TGAATTAATG AACCTAGTTA AGCCCGGGGA GAGAATTGAG GAGGCTGTGG CTAGAATGCT TAAGTAA
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Protein sequence | MKCIDVEGLV KSFNGVRALD GLSFGVECSD SAALLGPNGA GKTTTMRIIA GLLKPDSGIV RVCGFNTIKE PRLTKACLGY LPEDAAPFMN LTVRENLEYV GLVRGLSNVK DAVEWVSQAL GLDGLMNAQP ASLSRGNRQR VALAMAIIHR PKVLLLDEPL NYLDIPTQEN VIELLLSMRR NGTTMLISTH IMTVAERLAN RVIMINRGRL IWEGSISELM NLVKPGERIE EAVARMLK
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