Gene Cmaq_0728 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCmaq_0728 
Symbol 
ID5709063 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaldivirga maquilingensis IC-167 
KingdomArchaea 
Replicon accessionNC_009954 
Strand
Start bp762972 
End bp763475 
Gene Length504 bp 
Protein Length167 aa 
Translation table11 
GC content37% 
IMG OID641275229 
Producthypothetical protein 
Protein accessionYP_001540554 
Protein GI159041302 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones47 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.0000828414 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGTCGGTTA GGTATTTACG TTTAGGTAAC ACAATAAGCC TAATTGCAGG AGTCTTAATA 
CTACTGGTTC TCTTAGGAAT AATGATTCAT GGGATACAAG CAGTGTTTTA CCTATGGGTT
TTAGTAGTAA TGTGGATGCT TTGGGTCATG GGAATTGCAG CCTACGTATC CTATGTTTTA
GCCGCCTTAA AGATTAGGCA GTTAATGAAG TATGCCGGTG TATTAGCATT GATAGTAACA
TTAATGGGTT TAATACTGCT TACTGAACAT AAGATGCTTG GTGCCGAATT AATAGTCTTA
GGCTACTTCC TAGAACCCAT AGCTGGTGTA TCCCTTTACT TAAGATTACT TGACTTCAAT
AAACCAGCAG CACACGTGTT CTTCTGGGGT GCCGTTATAT TTACCGTGGG TTTACCCTTA
ATACTGATTA AGAATACTTA CATCTCATTA ATAGGTGATT TAATTAAAAC AATTGGGCTC
ATAATCCTAA TACTTAAAGA TTAG
 
Protein sequence
MSVRYLRLGN TISLIAGVLI LLVLLGIMIH GIQAVFYLWV LVVMWMLWVM GIAAYVSYVL 
AALKIRQLMK YAGVLALIVT LMGLILLTEH KMLGAELIVL GYFLEPIAGV SLYLRLLDFN
KPAAHVFFWG AVIFTVGLPL ILIKNTYISL IGDLIKTIGL IILILKD