Gene Cmaq_0720 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCmaq_0720 
Symbol 
ID5709420 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaldivirga maquilingensis IC-167 
KingdomArchaea 
Replicon accessionNC_009954 
Strand
Start bp755232 
End bp755894 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content38% 
IMG OID641275219 
Producthypothetical protein 
Protein accessionYP_001540546 
Protein GI159041294 
COG category[S] Function unknown 
COG ID[COG1590] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000000000743428 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGTTAAGCA CTGTGGCTGA TGTTTATGAG GTCAGGAAGA GCAGATTCGT GGAGAGGCTT 
ATTAAGGAGG GGGAGGAGGG TAAGGTTGAC TTTGACATAT TTGATTTCCT AAGGGAATTC
AATACATTAA GCAACTATTA CACAACCAGT AGCTGCAGTG GCAGGATAAT GATTATTAAT
GCATTCTCAC TCAGCTTCGC TAAGGGTAGG GGTCTAGCTA AAATACTGGC TAAATGGCAT
AGACCAGTTA CTTTAAGTGA AGTATTGAGC GTTGTTAATA ATGGTGCTAA TCTATGGTTA
CTAACCAGGG GGCCGATACT TCATGTTGTT GCTAGAAACA TGGAATCAGC CGTGGATTTA
TCTAAGCTGG CTAAAGATGC TGGATTTAAG AGAAGCAGTA TTTTATCCAT TAAGGATTGG
GGGGTGGTTA TTGAGATTGA GAGTGATGAT AGGTTGGATA TACCCATTAA GATTAATGGT
AATTTACTCT TCAACAATAA TCAGCTTAAT GAAATCATAA ACACAGCCAA TGAGACACTA
ATGTTTGGTA AATTAAGGTT AGTTAGGTTA ATTAAGTTAA TTGAATCAAG GTACTTTAAT
AGGAGTTATA GTCAGGATAA TGAAGCACTA GTGCCATATA GGGTCTTTAG GAGGGGTCTT
TAA
 
Protein sequence
MLSTVADVYE VRKSRFVERL IKEGEEGKVD FDIFDFLREF NTLSNYYTTS SCSGRIMIIN 
AFSLSFAKGR GLAKILAKWH RPVTLSEVLS VVNNGANLWL LTRGPILHVV ARNMESAVDL
SKLAKDAGFK RSSILSIKDW GVVIEIESDD RLDIPIKING NLLFNNNQLN EIINTANETL
MFGKLRLVRL IKLIESRYFN RSYSQDNEAL VPYRVFRRGL