| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cmaq_0702 |
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| Symbol | |
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| ID | 5709810 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Caldivirga maquilingensis IC-167 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009954 |
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| Strand | + |
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| Start bp | 737390 |
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| End bp | 738874 |
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| Gene Length | 1485 bp |
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| Protein Length | 494 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641275200 |
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| Product | putative alpha-isopropylmalate/homocitrate synthase family transferase |
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| Protein accession | YP_001540528 |
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| Protein GI | 159041276 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0119] Isopropylmalate/homocitrate/citramalate synthases |
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| TIGRFAM ID | [TIGR00977] 2-isopropylmalate synthase/homocitrate synthase family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0000000408597 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | TTGACGCTTG TTCTTGATGA GCTCGGTGTT GACTATGTTG AAGGTGGTTG GCCTGGATCA
AACCCTAAGG ATGAGGAGTA CTTTAAGGAG ATTAAAAAGT ATTCACTGAG TCATGCCAAG
GTTGCTGCAT TCAGCAGCAC TAGGAGGAAG GATACTAAGC CCAGTGAGGA CCCAAGCCTA
AACGCAGTAT TAAGGACTGA TGTTGATACT GCGGTGTTAT TTGGTAAATC ATGGGTGCTT
CACGTTAATG AAGTGTTGAA GGTGAGTAGG GAGGATAACC TTGAAATGAT ATATGACAGT
ATCAGTTACT TGAAGTCACA TGGCCTTGAC GTAATCTTTG ATGCTGAACA CTTCTACCAA
GGCTTTAAGG ATGATCCTGA TTACGCTCTC TCCGTTGTGA AGACTGCTGA GGACGCTGGG
GCCAAGGTAG TGGTGTTGGC TGATACTAAT GGTGCTATGA TGCCTAATGA GGTTTATGAA
ATAACTAAGA GGGTAGTGGG TACTGTTAGG ATTAAGATTG GTTTACACAT GCATAATGAC
TCAGGCTGCG CAGTAGCTAA CACGGTCATG GGTGTCTTAG CTGGGGCGAG GCATGTTCAG
GGAACAATTA ATGGTATTGG GGAGAGGACC GGTAACGCTG ACTTGGTTCA AGTAATACCG
AACCTAATTA TTAAGGTTGG CTTAAGGGCG TTAAACGGCT CAAGCAGCTT AAGGAAGCTG
AGGGAGGTCT CCAGGTTAGT TTATGAATTA GCAGGTCTAC AGCCTAACCC GTATCAACCG
TATGTGGGTG ACTACGCGTT TACGCATAAG GCTGGTGTTC ATGTTGATGC TGTTTTAAAG
AATCCAAGGG CCTACGAGCA TATTGACCCT GAAACAGTGG GTAATTCAAG GCGCTTCATA
TTATCTGAGT TATCAGGTTC ATCTAACCTG GTGGTTTACC TGGAGGAGAA TGGTATTAAG
GTTGATAAGA AGGATGAGAG GGTTAAGAGG GCGTTAATGA GGATTAAAGA ACTTGAGAAT
AAGGGCTACA GCTTCGATCT GGCTCCAGCC TCAGCGGTCC TAATAGCGTT AAAGGAACTT
AACCTATACA GGGAGATGAT TAAGGTGGAG TATTGGAGGG TCATTGATGA AAGCGGCGTG
AATCTGGCGG TGGTTAAGGT TAATGGGCAG CTTGAGGTGG CTGAGGGGGT TGGTCCAGTT
CATGCAGTTG ACTTAGCATT AAGAAGAGCA CTTCAGAAGA TTTACCCTGA ACTCTCCAGG
GTTACTTTAA CAGACTACAG GGTTGTATTA CCCTCTGAGG TTAAGAATAC TGAGAGCCTA
GTTAGGGTAA CGGCGGAGTT CACTGATGGT GTGAGGAGGT GGAGGACCAT TGGGGTCTCC
ACAAGTGTAA TTAAGGCCAG TATTGAGGCT CTGGTAAATG GTCTTGATTA TTATCTTCAA
TTAAGCAGGT TAAGGGTTAT TGAGGGGGCT CAGCGTTCAC CTTAA
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| Protein sequence | MTLVLDELGV DYVEGGWPGS NPKDEEYFKE IKKYSLSHAK VAAFSSTRRK DTKPSEDPSL
NAVLRTDVDT AVLFGKSWVL HVNEVLKVSR EDNLEMIYDS ISYLKSHGLD VIFDAEHFYQ
GFKDDPDYAL SVVKTAEDAG AKVVVLADTN GAMMPNEVYE ITKRVVGTVR IKIGLHMHND
SGCAVANTVM GVLAGARHVQ GTINGIGERT GNADLVQVIP NLIIKVGLRA LNGSSSLRKL
REVSRLVYEL AGLQPNPYQP YVGDYAFTHK AGVHVDAVLK NPRAYEHIDP ETVGNSRRFI
LSELSGSSNL VVYLEENGIK VDKKDERVKR ALMRIKELEN KGYSFDLAPA SAVLIALKEL
NLYREMIKVE YWRVIDESGV NLAVVKVNGQ LEVAEGVGPV HAVDLALRRA LQKIYPELSR
VTLTDYRVVL PSEVKNTESL VRVTAEFTDG VRRWRTIGVS TSVIKASIEA LVNGLDYYLQ
LSRLRVIEGA QRSP
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