| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cmaq_0687 |
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| Symbol | |
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| ID | 5708543 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Caldivirga maquilingensis IC-167 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009954 |
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| Strand | - |
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| Start bp | 724292 |
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| End bp | 725671 |
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| Gene Length | 1380 bp |
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| Protein Length | 459 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641275189 |
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| Product | 4-aminobutyrate aminotransferase |
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| Protein accession | YP_001540517 |
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| Protein GI | 159041265 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0160] 4-aminobutyrate aminotransferase and related aminotransferases |
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| TIGRFAM ID | [TIGR00700] 4-aminobutyrate aminotransferase, prokaryotic type |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.00660505 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCCTAACT GGTACTGGGA TGTTAAGCCA AGTGACGTCC CAAGAATAAT AGTGGAGCCC
CCTGGACCCA GGGCCTTAAG TATTGTTAAG AGCGATGAGT CACTGATAAT GCAGTCCTTT
GGGCGATGGT ACCCCCTAGT GATTAAGAGG GGATTCGGCC CAGTGATAGA GGATGTTGAC
GGTAACCTAT ACGTGGACTT TAACTCAGGT ATAGCAGTCA TGAATGTTGG GCACTCCCAC
CCAAGGATTG TTAAGGCTAT AAGGAATCAG GCAGGTGAAT TCACCCACTA CAGTTTAACT
GACTTCTACT ATGAATTAGC CGTTAAACAC GCCTCAATGT TAATTGAAGT AACCCCAATA
AGTGGCGGGA AGAGCGTCTT CTACGCCAAT TCAGGTACTG AGGCGATAGA GGGTTCCCTT
AAGATAGCTA GGGGGTATTT CAGGAATCAG AGGCCTTACG TTATGGCCTT CCTAGGTGCA
TTCCACGGTA GGACTTATGG TTCAATGTCC TTAACAGCCA GTAAACCTAT TCAGCGATTT
GGGTTTAACC CAATGATGCC TAATGTCATT CACGCACCAT ACCCGTATCC ATACAGGTGC
CCCTTCGGTA AGAGGCTGAG TGAGGAGGAG TGTGGCGAGC AAGCTTTATC GTTCATTGAG
GATTGGGTAT TCGGTAGGTT AGTTGATCCA AGTGAGGTGG CTGCAGTCTT CATTGAACCC
ATTCAAGGTG AGGGGGGTTA CGTTGTACCA CCGGTTAACT TCATGAGAGG GTTAAGGAAG
ATTACTGAGG AGCACGGTAT AATGCTGGTT GTTGATGAGG TTCAATCAGG CTTCGGTAGA
ACCGGTAAGT GGTTTGCAGT GGAGCACTTC GGCATTGAAC CTGACTTAAT AGCCATGGCT
AAGGCCATAG CGGCTGGCCT ACCATTAGGA GCCATTGTGG GTAAGGCTAA CTTAATGAAA
CTGCCTAAGG GTTCCCACGC CAATACCTTC GGTGGTAATC CAGTGGCCTT GGCTGCAGGT
ATTGAGGTGA TTAACGTTAT TAAGGATGAG GACTTACTTA CAAACGCCTC AAGGGTTGGG
GATTACATTA TGAGGAGGTT TAAAGAGGAG ACTGATTCAA GCAGGTTAAT TGGTGACGTT
AGGGGGCTTG GATTAATGAT TGGTGTTGAG TTGGTTAAGA ATAAGGTAAG CAAGGAACCT
GCCGTTAAGG AGCTGGGGGA GGTGTTAATG AGATCGTTTA AGAGGGGGGT GGCTGTAATA
GGTTCGGGTA AATCAACAAT AAGGATTGCA CCACCCCTTA ACATACCCAT TGAATTAGCT
GAAAAGGCTG TTGACATAAT TATTGAATCA ATAAGGAGCG TTGAAAGGGA AACCCCCTAA
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| Protein sequence | MPNWYWDVKP SDVPRIIVEP PGPRALSIVK SDESLIMQSF GRWYPLVIKR GFGPVIEDVD
GNLYVDFNSG IAVMNVGHSH PRIVKAIRNQ AGEFTHYSLT DFYYELAVKH ASMLIEVTPI
SGGKSVFYAN SGTEAIEGSL KIARGYFRNQ RPYVMAFLGA FHGRTYGSMS LTASKPIQRF
GFNPMMPNVI HAPYPYPYRC PFGKRLSEEE CGEQALSFIE DWVFGRLVDP SEVAAVFIEP
IQGEGGYVVP PVNFMRGLRK ITEEHGIMLV VDEVQSGFGR TGKWFAVEHF GIEPDLIAMA
KAIAAGLPLG AIVGKANLMK LPKGSHANTF GGNPVALAAG IEVINVIKDE DLLTNASRVG
DYIMRRFKEE TDSSRLIGDV RGLGLMIGVE LVKNKVSKEP AVKELGEVLM RSFKRGVAVI
GSGKSTIRIA PPLNIPIELA EKAVDIIIES IRSVERETP
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