| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cmaq_0685 |
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| Symbol | |
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| ID | 5709192 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Caldivirga maquilingensis IC-167 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009954 |
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| Strand | + |
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| Start bp | 721314 |
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| End bp | 723362 |
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| Gene Length | 2049 bp |
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| Protein Length | 682 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 641275187 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001540515 |
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| Protein GI | 159041263 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.025918 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTATAA AATACACCTG GTTCAAGTGG ATCCTAGTAG TCGCTACAGT TCTAGTAGTG
AGTTTAGTGG TGGGTCAGGT TAATTTTGGG CGTACCGCAG TAAACCCAAT ACTTAATGCC
CAACAGTATA ATATTACACC CTACAATACA ATATATGTAT TCACCATAAG TAGCCCACCC
TTAACCAGTA TGTCGCTTTA TAACCCGAAC ATATTCCATG GTGGTATTGC ATGGTATGGT
GTTGTTCAAT CACATGTAGC GGCGATAAAT TACACCACTG GTGAAGAGAT TCCAATACTG
GCTAAGAACT GGACCCTTCA AGTGCTTCCA AATGGTACAC TGGCTATTTA CGTAACCTTA
AGGCAAAGTG GGATGAGTAA TGGGCAACCA GTCACGTGTT GGGATCTATT GGCTAATAAT
ATTGCTAATG GTTTAATACA CAACATGTGG GGTAACGTCA GCATTGTGAA TAACTACACA
TGCATATTCA AGATGCCTCA AGGCTACTAT GCACCACCCA CTAGCCCAGC TGCTGAGGCT
TATGACGTAT TCTGGGCGCT TAACTGGGGT GGGGTGGCAT TGGTCTGGAC ATTTAATGCA
TGGTACCCAT TAATGGAGGC AACATTGGCT AACTATAGTT GGCTCTGGCT CTTCAACTTT
GGTAACGCCA CCCAGCAGGC TCAGGCTAGA AAAGTATTAA CGCCATTAAT TAATGAGTTA
TTCACTGCAA AATTACCACC TAACACACCT ACAACAGGCC CATTCTATGT TTGCGATATT
ACACCTGAGT ACATTCTCCT TTGTAAGAAT CCGTATTGGT ATGATGCTAA GGATATTAAG
GTTGATTACA TTGTTGAATG GCAGTACTCA TCAATGACCC AGGTTTACGC AGCATTGGCT
TCCGGTAAGA TCAGTATCTG GCGGACCGGG GGCTCGTCAA TTTCATCCAC GTTGCTTAGT
CAAATACTTA GGAATCCATA CATAGAGATG AATATTTACC CAGGCTTCGG TGGTGATGCC
TTGTATTTCA ATTTCCTTAA TCCTTGGTTG GCTATGCCTC AGGTTAGGCA GGCTATTTAC
TATGCTGTTA ATTGGACTCA ATTAGCCCAA GCAGCATACG GGCCTCAATT CATATTACCT
TCACCAACTC CTCAAGTAGG TATAATGAAT GATATGTATC CAAGCTTAGT GCAGCAGGTT
ATAGGCTATT GGGCTAGTCA AGGATCACCA TTAATAAACT ACACTTATAA TCCATCCATG
GCTACTCAAT TGCTTGAGAG TGCTGGTTTC ACTGAGAAGA ATGGTGTATG GTATACACCC
AACGGCTCAG AATTCACGTT AACACTATAC ATTAGTTCAG GAGCATCACC GCCGCAGTTG
GCTTTAGCTA ATAGTATTGC CAATGCGTTA ACAAGCTTCG GAATACCAAC AACAGTAACT
GTTTACCCAA GCTCAGAGTT CAGTACCATA GTTCAACAAG GTAAGTATGA TTTAATATTC
TTGTATTATG ATGGTGCACC TGAACCTGGT TTTCCATCAT TCTTCCCAGA GGGTCCAATA
CCAGCAGCCT ACTTCCAAGG TTACCCATTC AATGCAACGC ATTGGAATAT GGTTGTTACC
CTACCTAATG GTACTCAAGT TACCCCACTT CAAGCATGTA CTGATTACTT GCTGAGTCCA
GCTAGGATAT TCTCATGTTA CGCAATATCA ATGTGGGCTT GGAACCACTA TACACCATTC
ATACAGATTG ATAGGAATAC TTGGATATTC TTCCTAAACA CCCAGTATAT TAACTGGCCG
CTTAACGACA CGTCAATATG GGAGAACCTA CTAACCATAG AAACAGAGGC TTGGACTGCA
TTACTCATGC ACGTATCATT CAAGTCACCT TCAGTCGCAA CTACAACTAC CTCCCCAGTA
ACCACAACTA CCCCGAGCAC TGTAACTAAG GTTGTTACAC CGTCATATAT TATATATGCT
GTAGTGGCTG TAGTTGTAGT GGTTATTGTT GCGGCTGTTG TTGCGATAAT ACTGGTGAGG
AGAAGGTGA
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| Protein sequence | MAIKYTWFKW ILVVATVLVV SLVVGQVNFG RTAVNPILNA QQYNITPYNT IYVFTISSPP
LTSMSLYNPN IFHGGIAWYG VVQSHVAAIN YTTGEEIPIL AKNWTLQVLP NGTLAIYVTL
RQSGMSNGQP VTCWDLLANN IANGLIHNMW GNVSIVNNYT CIFKMPQGYY APPTSPAAEA
YDVFWALNWG GVALVWTFNA WYPLMEATLA NYSWLWLFNF GNATQQAQAR KVLTPLINEL
FTAKLPPNTP TTGPFYVCDI TPEYILLCKN PYWYDAKDIK VDYIVEWQYS SMTQVYAALA
SGKISIWRTG GSSISSTLLS QILRNPYIEM NIYPGFGGDA LYFNFLNPWL AMPQVRQAIY
YAVNWTQLAQ AAYGPQFILP SPTPQVGIMN DMYPSLVQQV IGYWASQGSP LINYTYNPSM
ATQLLESAGF TEKNGVWYTP NGSEFTLTLY ISSGASPPQL ALANSIANAL TSFGIPTTVT
VYPSSEFSTI VQQGKYDLIF LYYDGAPEPG FPSFFPEGPI PAAYFQGYPF NATHWNMVVT
LPNGTQVTPL QACTDYLLSP ARIFSCYAIS MWAWNHYTPF IQIDRNTWIF FLNTQYINWP
LNDTSIWENL LTIETEAWTA LLMHVSFKSP SVATTTTSPV TTTTPSTVTK VVTPSYIIYA
VVAVVVVVIV AAVVAIILVR RR
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