Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cmaq_0678 |
Symbol | |
ID | 5709458 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Caldivirga maquilingensis IC-167 |
Kingdom | Archaea |
Replicon accession | NC_009954 |
Strand | - |
Start bp | 713655 |
End bp | 714089 |
Gene Length | 435 bp |
Protein Length | 144 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 641275180 |
Product | ribosomal protein L13 |
Protein accession | YP_001540508 |
Protein GI | 159041256 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG4352] Ribosomal protein L13E |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 38 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTCCATTA ATCCGCCTGT GGCCATGGTT AAGTCGCCTA AGGATGGGAA GATGAAGCAG GGTAGAGGAT TCTCCATTAG TGAGATTAAG GCCATTAACT TAACTGTTAA TGAGGCTAGG CTGTTAGGTA TACCTGTTGA TACCAGGCGT AAATCAACCT GGGAGTGGAA TGTTAAGGCT CTTCAGGAGT ACGTGAGTAA GGTAGTTAAT GTTACTGATG TATCCCAGTT ACCATTACCC TCAATACCCA AGAGGAGACT GGTAAAGCCT AAGAGAGGGA GGGCTTTCAG GGGTGTTACA CCAGCGGGTA GGAGGGCTAG GGGTCTCCTT AGTATTGGTT TAAGGGAGAC TCATAGGTAT AAGTGGAGGA GGAAGCAGAG GCAGCGTGAG TTGAAGCTTA GGCATGAGGT AGTCTTCCGT AAGGGAGGCG CGTAA
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Protein sequence | MSINPPVAMV KSPKDGKMKQ GRGFSISEIK AINLTVNEAR LLGIPVDTRR KSTWEWNVKA LQEYVSKVVN VTDVSQLPLP SIPKRRLVKP KRGRAFRGVT PAGRRARGLL SIGLRETHRY KWRRKQRQRE LKLRHEVVFR KGGA
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