Gene Cmaq_0678 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCmaq_0678 
Symbol 
ID5709458 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaldivirga maquilingensis IC-167 
KingdomArchaea 
Replicon accessionNC_009954 
Strand
Start bp713655 
End bp714089 
Gene Length435 bp 
Protein Length144 aa 
Translation table11 
GC content48% 
IMG OID641275180 
Productribosomal protein L13 
Protein accessionYP_001540508 
Protein GI159041256 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG4352] Ribosomal protein L13E 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCCATTA ATCCGCCTGT GGCCATGGTT AAGTCGCCTA AGGATGGGAA GATGAAGCAG 
GGTAGAGGAT TCTCCATTAG TGAGATTAAG GCCATTAACT TAACTGTTAA TGAGGCTAGG
CTGTTAGGTA TACCTGTTGA TACCAGGCGT AAATCAACCT GGGAGTGGAA TGTTAAGGCT
CTTCAGGAGT ACGTGAGTAA GGTAGTTAAT GTTACTGATG TATCCCAGTT ACCATTACCC
TCAATACCCA AGAGGAGACT GGTAAAGCCT AAGAGAGGGA GGGCTTTCAG GGGTGTTACA
CCAGCGGGTA GGAGGGCTAG GGGTCTCCTT AGTATTGGTT TAAGGGAGAC TCATAGGTAT
AAGTGGAGGA GGAAGCAGAG GCAGCGTGAG TTGAAGCTTA GGCATGAGGT AGTCTTCCGT
AAGGGAGGCG CGTAA
 
Protein sequence
MSINPPVAMV KSPKDGKMKQ GRGFSISEIK AINLTVNEAR LLGIPVDTRR KSTWEWNVKA 
LQEYVSKVVN VTDVSQLPLP SIPKRRLVKP KRGRAFRGVT PAGRRARGLL SIGLRETHRY
KWRRKQRQRE LKLRHEVVFR KGGA