Gene Cmaq_0643 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCmaq_0643 
Symbol 
ID5708894 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaldivirga maquilingensis IC-167 
KingdomArchaea 
Replicon accessionNC_009954 
Strand
Start bp679619 
End bp680818 
Gene Length1200 bp 
Protein Length399 aa 
Translation table11 
GC content47% 
IMG OID641275144 
Productaminotransferase class I and II 
Protein accessionYP_001540473 
Protein GI159041221 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0436] Aspartate/tyrosine/aromatic aminotransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones48 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGGTATTG TGCGTAATCT CTCCGATAGG ATATCAGCCT TAAGGGAATC ACCAACTAGA 
AGAATTGATG CAATAAGGGA GAGGCTTAGA CGCGAGAACA GGGATATAAT AGTCTTATCC
GCTGGTCAAC CAAGCATTCC CCCACCCCCT GAGATTAGGG CAATTATGGC TGAGGAGTTG
GCTAAGGAGA GCATGGATTT ATACGCCTAT ACGCCAAGCC AAGGCATAGT TGAGTTAAGG
GAGGCTGTCT CCGAGGATTT GAAGAGGCTT GGTTCCCTTG ACGTTAAGCC TGATGACATA
GTTATTGTGG CCGGCGGCCA GGAGGCCATG TTCGCCACAT TAATGACCAT ACTGAATCCT
GGTGATGAGG TAATATTAAT GGATCCAACA TACTTCGGTT ACAAACCCTT AATAGAGTAC
TTTGGTGCCA GGATTAAGAG ACTGAGGTTA AGCATGGATG ATGGCTTTAG GATAAACGTG
GAGGCGCTTA AGGAGTTAAT AAGCAGTAGG ACTAAGGCAA TTATCCTAGT CTCACCGGAT
AACCCAACGG GCTCCATAAT TAGTGAGGAC GTTGCTAAGG CTTTAGTCGA CTTAGCTAGG
GATAAGGACT TCTGGATAAT ATCGGATGAA GCCTACAGGA CTCTAATATA CGAGGGTAGT
CACGTCTACC TCTACAAGTA CGCCCCAGAG TACGTAATAT CCCTAAACAC GTTCTCAAAG
GACCCAGGGA TACCAGGTTG GAGACTTGGT TTCGTCTACG GGCCCCGTGA GATTACTTCA
AGAATAAAAC TAGCTGCGGA GGAGATGACC TACTGTCCAC CATCCTTCGC TCAGCGTTTT
GTGGCAACAT ACTTAAGGTC TGAGGTTAGG TTAAAGCACA TTAAGTACGT TGTTGAGCAA
TACCGCGCCA AGAGGGATAC CGCTGTTGAG GCAATTAGGA GGAATTTACC TGAAGCCAGA
TTCGTAGTCC CGAAGGGCTC AATGTTCATT TTCGTTGACT TATCTAAGTA CATTGATGAT
AGTGATAAAT TCGCGGAGTT CGCCATGGAG AAGTACAGTG TAGCCCTGGT TCCAGGAAGC
TACTTCAGTG AGCAGTATAA GGCTGCTGTG AGGGTTTCGT TCGTGTGGGA GAGGACTGAC
CGTCTAGTAG AGGGTATTAG GAGGCTGGCT GAGGCAGCTA AGGCTTATAA GGCTTCATGA
 
Protein sequence
MGIVRNLSDR ISALRESPTR RIDAIRERLR RENRDIIVLS AGQPSIPPPP EIRAIMAEEL 
AKESMDLYAY TPSQGIVELR EAVSEDLKRL GSLDVKPDDI VIVAGGQEAM FATLMTILNP
GDEVILMDPT YFGYKPLIEY FGARIKRLRL SMDDGFRINV EALKELISSR TKAIILVSPD
NPTGSIISED VAKALVDLAR DKDFWIISDE AYRTLIYEGS HVYLYKYAPE YVISLNTFSK
DPGIPGWRLG FVYGPREITS RIKLAAEEMT YCPPSFAQRF VATYLRSEVR LKHIKYVVEQ
YRAKRDTAVE AIRRNLPEAR FVVPKGSMFI FVDLSKYIDD SDKFAEFAME KYSVALVPGS
YFSEQYKAAV RVSFVWERTD RLVEGIRRLA EAAKAYKAS