| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cmaq_0620 |
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| Symbol | |
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| ID | 5710215 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Caldivirga maquilingensis IC-167 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009954 |
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| Strand | + |
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| Start bp | 653942 |
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| End bp | 655846 |
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| Gene Length | 1905 bp |
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| Protein Length | 634 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 641275122 |
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| Product | DEAD_2 domain-containing protein |
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| Protein accession | YP_001540451 |
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| Protein GI | 159041199 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG1199] Rad3-related DNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 61 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGTGCACC TTAACGCTGG TCTAATGATT AATACTAAGG TGAGTAAGTA CTTACCGTAC
GTTGGTTGGA GGCCTCTTCA AGCTAAGATT GCGGACTTCA TATACAGTAA CCTAGGGGAG
GGTAAGGGTA TTGTGGTTGA GGCACCCACT GGTGTGGGTA AGACTGCAGC AGCCCTGGCT
GCTGCCTTAG CCTACAGTGA GGGTGAGCCT ATTAAGATTA TTTACATGAT TAGGACTAAT
AATCAGGCTG CTGCACCCAT GAGGGAGTTG AGTAGGATGC TTAAGATTAG GGGAGTCTTC
ATACCTTATG TCCTAATTAG GAATAGGGCC AGAATGTGTT GTATTTCATC AACATCCAGG
TTACCCTACA GGGACTTCCT AATGGAGTGT AATTACTTGA AGAGGACGGG GGAATGTAAC
TACTACGTTA AGTTGAAGAG CAATGGGGTA GATAGTAGCT TATTCATGGA TACTGTGGCT
GGCTTAGAGT CACCGGGTGA GTACGTTAAG TCAGTGTGCA AGTTAGGTGT GTGCCCTTAT
GATGCATCAA GGATGCTTAT AGATGAGTCA AGGGTTATAA TACTATCCTA CTACTACTTA
TTCTCCCTAA ACGCTCCCGA GGTGGTTGAC GTTGACTTAA AGTCATCAAT ACTTATAATT
GATGAGGCAC ATAACCTCCC CTACGCCATA CTTGACTTAA ACACCCAGTA CTTGACTGAG
GCCATGGTTA AGGTGGCCTT ATCTGATGTT AAGAGATTTG TGAATGATGT TAACGTTAAG
GCAGGTGCAT TAAGGGCCTT GGCATCGATT AGAGCCCTCT TCAGGGACTT ATTCAACGAC
GTGAGTGAGC AGGGTGAACG TAGGGTTGAT TCAAGTAAGA TCCTGGAGTA CTTCAATGAT
ATTGAATACT TGACTGAAGC CTCCAGTGAG GTTTTAGCCA GTAAGAGGAG TAGGGGTATT
CTTCTTGCCG GTACCCCATT GAGTGATATT ATTGATTTCT ATAGGTCAGT AATTAAGATG
CCTAAGGATA AGGCGCTCTT CCTATCCATG GGTAATGATG GTAAGGCTAT TGTAAGTAGG
TTAATGGATC CATCAGCGGC GGCTTCAGGG GTAATGAATA ATGCCTACAG TTTCATAGTT
ATGAGCGGTA CGATGCCGCC TACAAGGCTC TTCACAAGTC TACTTGGGGT TAAGGTTAAG
GTTAGTGAGT TGAGGATTGG GTTAACTGAG TACGTTAAGT CCTCTAATGT TAAGGCTGTT
GTTTACGGTG AAGTTACCAC GAAGTATACT GAGAGGAGTG AGGAGCAGTA CAGTAGGATT
GCTCAAGCAC TGATAAGCAT ATATGATGCG GTAAAGCATG GTGTATTAGC CGTCTTCCCA
TCGTACGATA CCCTTAAGGC TACTAGGAAG TATATTAGGC ATGGAGTTGA CTTAATTGTT
GAGATAGGTA CAACAACCAT AGAGGATGTT CTAGAGTCAA TTAAAGTTAA TCCACATAAA
TTAATACTGG CTGTGGCTGG AGGTAAGTTA GTTGAGGGCA TTGAGTTCAG GTTCAATGAT
GTTAATTACA TAGATGCCGT GGCTATAGTT GGTGTACCTT ACCCTGAGCC GAACGACTTC
ATGAATGGGC TAGTGGATGT GGTTAAGTCA AGGGCTAATT ACGATGACGC ATGGCACGCC
GTCTACACAT GGAACGCCTT AGTTAAGGTT AAGCAAGCCA TAGGCAGGGG GCTTAGGTCA
GATAAGGATA GGGTCTTCAT AATATTAATG GATTATAGGT TCAGGGATAA TCCAGTAATT
TGGAGGGAGA TGACGAATTA CCTACCTAAC ATTGAGGTTG CCTCAAATGA GGACGAGTTA
ATAAGCATGC TTAGGGAGTT CACCTCAATA AACACTAATC AGTGA
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| Protein sequence | MVHLNAGLMI NTKVSKYLPY VGWRPLQAKI ADFIYSNLGE GKGIVVEAPT GVGKTAAALA
AALAYSEGEP IKIIYMIRTN NQAAAPMREL SRMLKIRGVF IPYVLIRNRA RMCCISSTSR
LPYRDFLMEC NYLKRTGECN YYVKLKSNGV DSSLFMDTVA GLESPGEYVK SVCKLGVCPY
DASRMLIDES RVIILSYYYL FSLNAPEVVD VDLKSSILII DEAHNLPYAI LDLNTQYLTE
AMVKVALSDV KRFVNDVNVK AGALRALASI RALFRDLFND VSEQGERRVD SSKILEYFND
IEYLTEASSE VLASKRSRGI LLAGTPLSDI IDFYRSVIKM PKDKALFLSM GNDGKAIVSR
LMDPSAAASG VMNNAYSFIV MSGTMPPTRL FTSLLGVKVK VSELRIGLTE YVKSSNVKAV
VYGEVTTKYT ERSEEQYSRI AQALISIYDA VKHGVLAVFP SYDTLKATRK YIRHGVDLIV
EIGTTTIEDV LESIKVNPHK LILAVAGGKL VEGIEFRFND VNYIDAVAIV GVPYPEPNDF
MNGLVDVVKS RANYDDAWHA VYTWNALVKV KQAIGRGLRS DKDRVFIILM DYRFRDNPVI
WREMTNYLPN IEVASNEDEL ISMLREFTSI NTNQ
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