Gene Cmaq_0614 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCmaq_0614 
Symbol 
ID5710322 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaldivirga maquilingensis IC-167 
KingdomArchaea 
Replicon accessionNC_009954 
Strand
Start bp647405 
End bp648454 
Gene Length1050 bp 
Protein Length349 aa 
Translation table11 
GC content40% 
IMG OID641275115 
Producthypothetical protein 
Protein accessionYP_001540445 
Protein GI159041193 
COG category[S] Function unknown 
COG ID[COG2237] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones66 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGAAG AGAAGATACT GGTGCTTTGT GTAGATAGGG ATAATGATGT TGGGGAGAGG 
CTTGGTGTTA AGACTCCAGT TATTGGTAGG GATGAGGTTC TTAAGGTTGG GGTGGATTTC
ATAGTTAGAT ACCCTGATGA TTCTGATGCA AACGCCATAT TTGGGGCTAT TAGGGTTTAC
GATAGTTTAA GGCCAATATA CGGTAATAAC ATTGAGGTTG CCTTAGTAAC TGGTAGTAGT
GATAGTGATG TTGAGGCTGA CTTGAAGGTT ATGGCTGAGT TAGATAAGGT TTTAAGCGTC
TTTAATGCTG ACGGCATAAT ACTTGTCTCA GACGGCCCCT CCGATGAAGT GGTGCTTCCC
CTAATACAAT CAAGGAGAAC AGTGATATCT GTTAAGAGGA TTGTTGTTAA ACAGACTAGG
AGTGTTGAGG ATTTCGCTGT GTTAACTAGG TATTACCTTA GGAAGGCTTT TCTTGAACCA
GGGTGGAGGC AATACACGTT GGGTTTACCT GGACTGGTGG TTATGCTTTA CGGGATATGG
CTTCTGATTC CTCAATCAAT TAAGCCCATG ATAGCTTCAT CCTTATCACT ATTAATTGGC
GTAGTGTTAC TCTTCATAGC CTTTAACGCA TATAGGCCAC TCATATTATT CATAAGGCGT
TATGAAGTCA CATTCTTCAC AATACTGGTA ACCATAGTTA TACTAGCCAT GTACATAAAC
ATATACTCAC CCATACTGAG GACTAACCCC TACATGATCT TAATAGGGAA GCCATTAACC
CTACCTGAAA TTATAGGAAT AATATATGGT GCATTAGTGG CAGTATTAGT TATAGAGACT
TACTCAAAAA GCCACAGAAT ACCCTATGGA TACATAGCGT CAATTTCATT AATATCACCC
TTAACCGGAT TATCCTCAAT AATAGTACCC GGCTTCAACA TAGCATCATT CATACTATTC
CTCATAATAT ACGTATTAAT CAACATACTG GTGCTAGCTG TAATATTCGT GATTAGGAGG
CATATGAGGA GGATTAGTAT TGAACGGTGA
 
Protein sequence
MAEEKILVLC VDRDNDVGER LGVKTPVIGR DEVLKVGVDF IVRYPDDSDA NAIFGAIRVY 
DSLRPIYGNN IEVALVTGSS DSDVEADLKV MAELDKVLSV FNADGIILVS DGPSDEVVLP
LIQSRRTVIS VKRIVVKQTR SVEDFAVLTR YYLRKAFLEP GWRQYTLGLP GLVVMLYGIW
LLIPQSIKPM IASSLSLLIG VVLLFIAFNA YRPLILFIRR YEVTFFTILV TIVILAMYIN
IYSPILRTNP YMILIGKPLT LPEIIGIIYG ALVAVLVIET YSKSHRIPYG YIASISLISP
LTGLSSIIVP GFNIASFILF LIIYVLINIL VLAVIFVIRR HMRRISIER