Gene Cmaq_0597 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCmaq_0597 
Symbol 
ID5710073 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaldivirga maquilingensis IC-167 
KingdomArchaea 
Replicon accessionNC_009954 
Strand
Start bp626826 
End bp627263 
Gene Length438 bp 
Protein Length145 aa 
Translation table11 
GC content41% 
IMG OID641275098 
Productsignal transduction protein 
Protein accessionYP_001540428 
Protein GI159041176 
COG category[K] Transcription 
COG ID[COG2524] Predicted transcriptional regulator, contains C-terminal CBS domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAGTGA AAATTAATCA ACTAATGAGG AGTGGAGTAA TATCAGTAGA TGCTGCAACA 
CCCATAAAGG AGGCGGCTAA GGTAATGACT AGGAATAACG TAGGCCTGCT CGTGGTTATG
AGTAATGGGA GAATGACCGG TGTAGTCAGT GAGAAGGATA TAGTAAGGGC AGTGGCTAAT
GGCGTAAACC CAAGCGACCC CATTGAGAAA ATAACCACTA AGAGTGTAAT ATCAGTGAAC
CATGAATCAT CACTACATGA AGCAGCTGAG CTAATGCATA AGTTAAACAT AAGGCACTTA
GTGGTTGTTG ATGATAATAA TAATCCAGTG GGTGTAGTCT CAATAAGGGA TATTGTGGGT
GAATCAATTA GATTAAGGAC ACTTGCTGAG CAGGGGGTAG TTAATGATAC TGAGGAACCA
ATACCATGCA CTGATTAA
 
Protein sequence
MSVKINQLMR SGVISVDAAT PIKEAAKVMT RNNVGLLVVM SNGRMTGVVS EKDIVRAVAN 
GVNPSDPIEK ITTKSVISVN HESSLHEAAE LMHKLNIRHL VVVDDNNNPV GVVSIRDIVG
ESIRLRTLAE QGVVNDTEEP IPCTD