Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cmaq_0579 |
Symbol | |
ID | 5709070 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Caldivirga maquilingensis IC-167 |
Kingdom | Archaea |
Replicon accession | NC_009954 |
Strand | + |
Start bp | 609356 |
End bp | 610441 |
Gene Length | 1086 bp |
Protein Length | 361 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 641275080 |
Product | GHMP kinase |
Protein accession | YP_001540410 |
Protein GI | 159041158 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0153] Galactokinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.0000000000495739 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.000433765 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGATAGTTT CATCAGCCCC AGGCAGGGTG GATCTATTCA ACACTCACCA GGACTATAAG GGGTTACCTG TGGTTCCAGC TGCAGTGGAT CTAAGGACTA CTGTTGAGGG GGAGTTGAGG ATGGGTGATG TTATTAAGGT TAAGTCAATT AACATGAATG AGGAGGTTGA GTTAAGGATG AGTGATGAAT TGAAGGTTGG GCAATGGAGC AGTTACGTAT TAGCCGCATT GAAGGCTTTA TCAATGCACG GTTACTTCAT AGGTGGTGCC GAGTTAACAA TAAGAAGCAG TGTACCCGTG GGTTCAGGGT TAGCCAGCAG TGCTGCATTA CTGGTTTCAG TGGTGAACTG GTTCAATAAG GCTTACGGCT TAGGCTTATC TAAAAGGGAT ATTGCTGAAT TGGCCTATGA GGCTGAGCAC AATGTAATGG GCATACCCTG TGGTAGACTT GACCAATACT CCTCATCATA TGGAGGCCTA ATAATACTAG AGACTAGGCC ACCCTACAGG GTTGAGGAAC TGGGTGTTAA GGGCCTTGAC TTCATTGTTG TTGACTCAGG GGTTAGGCAT AGTACAATGA ATGTGCACAC GGTTAGGCAG AGGGAGCTTA GGGAGGCCCT CAGTATGCTT AAGGAGTCCA TACCGAGGAG TCATTGGGAT AAATTAAATA AGCCACTTGA TGAGATTGAT TGGGATTGGT TAGCCGCAGC GGCTAAGGAT TACTTAAACA CACTGAGTGA CGTGCATAGG AGGAGACTTG AATTCACAAT ACTCATGAAT GAGTCAACAA AGAAGGCTAT AGTTGAGTTG AGGAAGAGTA AACCGGATAG GAGGGTTTTA GGTGAAATCA TGAATGAGCA GCATAGGTTA CTTAGGGACC TATATGAAGT CAGTATACCG GAGCTTGAGG AGATTAAGAG GGTCCTCGAC CTCAATGGCG CATTAGGGTC TAAGATAAGT GGCGCAGGCA TGGGGGGTTC AATAGTGGCC TTAGCTGAGG ATAGGAAGGA GGCTGAGAGG ATCCTTGACT CCATTAAAAG TAAGTGGAGG GGTTGGGTTG TATCAATTGA TCAAGGCGTG TCATAA
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Protein sequence | MIVSSAPGRV DLFNTHQDYK GLPVVPAAVD LRTTVEGELR MGDVIKVKSI NMNEEVELRM SDELKVGQWS SYVLAALKAL SMHGYFIGGA ELTIRSSVPV GSGLASSAAL LVSVVNWFNK AYGLGLSKRD IAELAYEAEH NVMGIPCGRL DQYSSSYGGL IILETRPPYR VEELGVKGLD FIVVDSGVRH STMNVHTVRQ RELREALSML KESIPRSHWD KLNKPLDEID WDWLAAAAKD YLNTLSDVHR RRLEFTILMN ESTKKAIVEL RKSKPDRRVL GEIMNEQHRL LRDLYEVSIP ELEEIKRVLD LNGALGSKIS GAGMGGSIVA LAEDRKEAER ILDSIKSKWR GWVVSIDQGV S
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