Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cmaq_0561 |
Symbol | |
ID | 5709966 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Caldivirga maquilingensis IC-167 |
Kingdom | Archaea |
Replicon accession | NC_009954 |
Strand | + |
Start bp | 595196 |
End bp | 596290 |
Gene Length | 1095 bp |
Protein Length | 364 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 641275064 |
Product | nucleotidyl transferase |
Protein accession | YP_001540394 |
Protein GI | 159041142 |
COG category | [J] Translation, ribosomal structure and biogenesis [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1208] Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.00537127 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGTTGATG TAATTATACT GGCAGGGGGA TACGCCACAA GGCTTAGGCC CCTTACATTC ACTAAGCCTA AGCCCCTGCT CCCAATACTT AATAAGGCTG TCATAGATTG GATCCTTGAA TCAGTCACTA AAGTTAAGCC TAGTGATGTC TTCCTATCAG TCAGGTACAT GAGTGAGCTT ATTGAGAAGC ACGTTAACCA TAGGTGGGCT TCATTAAGAG ATATCGTTAA CATAATTAAG GAGGATAAGC CCCTTGGTGA CGGTGGCCCC GTCTCATACA TAGCCAGTAT GCGGGAGTTG GATGATATAG TGGTGGTCTT TAACGGTGAT ATATTCACTA AGATTGACCT GGAGGATGCA ATTAATGAGC ATGTTAGTAA GGGGGCTTTA GCCACAATAT GCTTAACCCA GGTCAATGAT GTGTCACAGT ACGGTGTGGT CACGCTTGGT AGAGATAATC TAGTAACGGG CTTCGTTGAG AAGCCTGAGC CGGGTAAGGC ACCATCAAAC CTTATTAACG CAGGCGTATA CATATTCAGT AAGGATGCGC TCAAGTACTT CCCTAAGCCT GGTACATTCG GTAAGTTGGC TATTGACATA TTGCCTAAAA TGATTAAGGA TCATAAGGTA TACGGCTACA TACTAAAGGG GTATTGGTAT GATATAGGAA CGATCACATC ATACTTAGAC GCTAACTTCA GGGCCCTTGA TGAGTACTGT AGGGATTGCC CAGCGCCTAA TAATGAAGCT TTAATTAAGC CTCCCGCTTT CATAGGGGAG AACGTTACAA TAGAGCCTGG GGCTGAGGTG GGGCCTTATG TGGTTGTGTT GAATAATTCA AGGATCGGCG CCCACAGTAG GGTTAAGTAC TCAGTCATAA TGGATAACAC AACTATTGAG AATGGTGCAT ACGTTGACTT AACAGTATTG GGGTCTGATG TATTCGTGGG TAAGTGGGCT AGGATTGAGA AGGGTGTTGT GGTTGGTGAT GGAAGCTACA TTGGTGACCA TGTTTTAATA AATAGGGATT CAATAATTGG GCCCTTCAGG GAGGTTAACC AGAGCATATA TGAGATTGGT AAGATACTTC TTTAA
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Protein sequence | MVDVIILAGG YATRLRPLTF TKPKPLLPIL NKAVIDWILE SVTKVKPSDV FLSVRYMSEL IEKHVNHRWA SLRDIVNIIK EDKPLGDGGP VSYIASMREL DDIVVVFNGD IFTKIDLEDA INEHVSKGAL ATICLTQVND VSQYGVVTLG RDNLVTGFVE KPEPGKAPSN LINAGVYIFS KDALKYFPKP GTFGKLAIDI LPKMIKDHKV YGYILKGYWY DIGTITSYLD ANFRALDEYC RDCPAPNNEA LIKPPAFIGE NVTIEPGAEV GPYVVVLNNS RIGAHSRVKY SVIMDNTTIE NGAYVDLTVL GSDVFVGKWA RIEKGVVVGD GSYIGDHVLI NRDSIIGPFR EVNQSIYEIG KILL
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