Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cmaq_0558 |
Symbol | |
ID | 5709020 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Caldivirga maquilingensis IC-167 |
Kingdom | Archaea |
Replicon accession | NC_009954 |
Strand | + |
Start bp | 593028 |
End bp | 593516 |
Gene Length | 489 bp |
Protein Length | 162 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 641275061 |
Product | dual specificity protein phosphatase |
Protein accession | YP_001540391 |
Protein GI | 159041139 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2453] Predicted protein-tyrosine phosphatase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 38 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.0112118 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACTGCC CTTACTGGGT TATTAAGGGT AAGTTAGCTG GTTCCTGTGC TCCAAGGGGT GTTAAGGATA TTGAGGCGTG GGGTAGAATG GGTATTAAGG CTGTTGTATC ACTGATTGAG GAGTTTGAGT TCAATGAAAT AGGCTTCCCT TTCAATAATT ATGTTGATGC CTTAAGAAGA TTCAACATTA GGCTACTTTA CTCACCCACT AAGGATGGTG AATCACCACC CCTTGATGAG TTCATGGCCA TACTAAGGTG GATTGATGAA AGGATTCATG AAAATGAGCC TGTTCTGGTC CACTGCAATG CTGGTGTTGG TCGTTCCCCC ACGGTAATAA TTGGTTACCT AATGTATAAG GGTTATAGTT TAAAGGAGGC CTATAGATTT GTATCAAACG TGAATGATAA GGTATCCCTC AGCTTTACTC AAGCATTAGC GTTAGAGGAG CTTGAGAAGC TCATAAGCAG GAGGAGCCTT GTACTTTAA
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Protein sequence | MNCPYWVIKG KLAGSCAPRG VKDIEAWGRM GIKAVVSLIE EFEFNEIGFP FNNYVDALRR FNIRLLYSPT KDGESPPLDE FMAILRWIDE RIHENEPVLV HCNAGVGRSP TVIIGYLMYK GYSLKEAYRF VSNVNDKVSL SFTQALALEE LEKLISRRSL VL
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