| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cmaq_0541 |
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| Symbol | |
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| ID | 5709804 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Caldivirga maquilingensis IC-167 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009954 |
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| Strand | - |
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| Start bp | 574136 |
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| End bp | 576343 |
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| Gene Length | 2208 bp |
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| Protein Length | 735 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641275045 |
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| Product | AAA family ATPase, CDC48 subfamily protein |
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| Protein accession | YP_001540375 |
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| Protein GI | 159041123 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0464] ATPases of the AAA+ class |
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| TIGRFAM ID | [TIGR01242] 26S proteasome subunit P45 family
[TIGR01243] AAA family ATPase, CDC48 subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.716512 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 0.437699 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGGTG AGGAGGGTTG GATTGAGCTT CGGGTGGCTG AGGCTAAGCA GAGGGATGCT
GGTAGACCCA TTGTTCGCAT TGACCCAACT ATTATGAGGG ATTACGGTAT TGAGCCAGGT
ACCGTGGTTT ACATTAAGGG TAAGAGGCTA ACGGCAGCTA AGGTAATGTA TGGTTTACCT
GAGGATGATG GTAGAGGGGT TATTAGGATG AATTCAATCA TTAGGAAGAA CGCCGACGTT
AGCGTTAATG ATACTGTTAA GGTTAAGGTA ACTGAAGCTA AGCAGGCTCA ATTGGTTAAA
CTAGCCCCAG TCTCAATGAC GTTATCAATT GAGCAGAACT TCGAGAATTA CGTTAAGCAG
AGGCTTAAAG ACTACGTGCT AATGGAGGGT GATTTAATAC AAATACTGGT GCTTGGGCAG
TCCCTAATAT TCCAGGCTAT TCAAGTTAAG CCAAGTAATA CACCGGTTAT TGTTGATGAT
GAGACCCAGG TTAAGGTGCT TGAGAAGCCT GTGGAGAATA TTAGGATACC TCGTGTTACT
TGGGAGGATA TTGGTGATTT GGAGGAGGCT AAGCAGAAGA TTCGTGAGCT TGTGGAGTTG
CCTCTTAAGC ATCCTGAGTT GTTTAGGCAT CTTGGTATTG AGCCCCCTAA GGGTGTTTTA
CTAATTGGTC CTCCTGGTAC TGGTAAGACT CTCTTGGCTA AGGCTGTTGC TAATGAGGCT
GATGCGTACT TCGTCTCCAT TAATGGTCCT GAGATTGTTA GTAAGTATTA CGGTGAGTCT
GAGGCTAGGT TGAGGGAGAT TTTCGATGAG GCTAAGCGTA ATGCACCAGC AATAATATTC
ATTGATGAAA TAGACAGCAT AGCACCAAAA CGCGAGGAAG TAACCGGTGA GGTGGAGAAG
CGCATAGTGG CCCAATTACT AACACTAATG GATGGTTTAC AGGAGAGGGG TCAAGTAGTT
GTTATAGGAG CAACGAATAG GCCGGATGCA GTGGACCCAG CATTAAGAAG ACCAGGAAGA
TTCGACAGAG AGATTTGGAT TAACCCACCT GACACTAGGG GTAGGTATGA GATACTGCTC
GTCCACACTA GGAATATGCC CCTTGAGAAG GATGTCGACT TAAGGAAGCT CGCTGAGATA
ACGTACGGCT ACACTGGAGC CGACATAGCT GCATTAGCCA GGGAGGCCGC AATGAAGGCT
TTACGTAGAG CTCTTCAACA AGGCATAATT AACCCAGATG ACCCTAACAC CTTCACTGAT
GAGAACCTGA GTAGAATAAA GGTTACTATG CAGGACTTCA TGGATGCTAT GCGTGAGATA
ATACCAAGTG CCCTGAGGGA GATTTACATT GAGGTTCCTA AGGTTCGCTG GAGTGATGTT
GGCGGATTAG AGGAGGCTAA GCAGGAGCTT AGGGAGGCTG TTGAGTGGCC TCTCAAGTAC
CCGAATAGGT TTAAGATAAT GGGCATTAGG CCGCCTAAGG GTATTTTGTT GTTTGGTCCT
CCTGGTACTG GTAAGACTCT CTTGGCTAAG GCTGTTGCCA ATGAGAGTGG TGCAAACTTC
ATAGCCGTCC GCGGCCCTGA AATACTGAGT AAGTGGTTTG GTGAGAGTGA GAAGGCTATT
AGGGAAATAT TCAAGAAAGC CAGAATGGCA GCACCATGCG TAGTATTCTT CGACGAAATA
GACGCAATAG CACCAGCAAG AGGATATACG TTGGATACAT CTGCGATGGA TAGGATTGTG
GCTCAATTAT TGGCTGAGAT GGATGGAATA GCGGCGTTGG AGAATGTTGT TGTTATAGGC
GCCACCAATA GGCCTGATAT GCTTGACCCA GCATTACTAA GACCAGGAAG ATTCGACAGA
ATAATATACG TACCACCACC GGATAAGCCC AGTAGGTTTG AGATACTTAA GGTGCATACT
AGGAATGTGC CCTTAGCTAA GGATGTTGAC CTATGGAGGT TAGCTGACTT ACTTGAGTAC
TACACTGGAG CCGACATTGA ACTACTGGTT AGGGAGGCGG CGTTAACGGC TCTTAGAGAG
AACCCTAATG CAACCGAGGT TACCATGGAG GACTTCTCCA AGGCAATGAA TAAGATTAGG
GCTACTTTAA CCCCTGAGAT GATTAAGTTC TATGAGTCAT GGTGGGATAG GTTTAAGACT
AGTCAAGTTA GGGCTAGGGA GCAGAGGAAG GCTGAAATAT TCATTTAA
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| Protein sequence | MSGEEGWIEL RVAEAKQRDA GRPIVRIDPT IMRDYGIEPG TVVYIKGKRL TAAKVMYGLP
EDDGRGVIRM NSIIRKNADV SVNDTVKVKV TEAKQAQLVK LAPVSMTLSI EQNFENYVKQ
RLKDYVLMEG DLIQILVLGQ SLIFQAIQVK PSNTPVIVDD ETQVKVLEKP VENIRIPRVT
WEDIGDLEEA KQKIRELVEL PLKHPELFRH LGIEPPKGVL LIGPPGTGKT LLAKAVANEA
DAYFVSINGP EIVSKYYGES EARLREIFDE AKRNAPAIIF IDEIDSIAPK REEVTGEVEK
RIVAQLLTLM DGLQERGQVV VIGATNRPDA VDPALRRPGR FDREIWINPP DTRGRYEILL
VHTRNMPLEK DVDLRKLAEI TYGYTGADIA ALAREAAMKA LRRALQQGII NPDDPNTFTD
ENLSRIKVTM QDFMDAMREI IPSALREIYI EVPKVRWSDV GGLEEAKQEL REAVEWPLKY
PNRFKIMGIR PPKGILLFGP PGTGKTLLAK AVANESGANF IAVRGPEILS KWFGESEKAI
REIFKKARMA APCVVFFDEI DAIAPARGYT LDTSAMDRIV AQLLAEMDGI AALENVVVIG
ATNRPDMLDP ALLRPGRFDR IIYVPPPDKP SRFEILKVHT RNVPLAKDVD LWRLADLLEY
YTGADIELLV REAALTALRE NPNATEVTME DFSKAMNKIR ATLTPEMIKF YESWWDRFKT
SQVRAREQRK AEIFI
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