| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cmaq_0535 |
|---|
| Symbol | |
|---|
| ID | 5709766 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Caldivirga maquilingensis IC-167 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009954 |
|---|
| Strand | + |
|---|
| Start bp | 569516 |
|---|
| End bp | 570457 |
|---|
| Gene Length | 942 bp |
|---|
| Protein Length | 313 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 641275039 |
|---|
| Product | ATPase |
|---|
| Protein accession | YP_001540369 |
|---|
| Protein GI | 159041117 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0714] MoxR-like ATPases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.0000789925 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 0.392501 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGTGATA CTCAAGCGGT AGGTACGGTA CTTAGTAGGA TGTTGACTGA GTTATCTAAG
GTTATTGTTG GTTATGAGGA GGAGGCCACA GTAATGTTCG CCACACTACT GGCAAGTGGC
CATGTCCTAC TTGAGGGTGT GCCTGGGGTT GGTAAAACAA CGCTGGCTAA GGCATTCGCC
AAGACCCTTA GCCTAAGCTT CAGTAGGATT CAATTCACCC CTGACCTTCT TCCAAGTGAT
GTTGTTGGTA CTGTGGTTTA TAACCCTAAG ATTAATGACT TCGAGGTTAA GCTTGGGCCA
ATATTCGCAA ACATAGTGCT TGCCGATGAG ATTAATAGGG CTCCACCTAA GACCCAGGCT
GGTTTACTTG AGGCAATGCA GGAGGGGCAG GTAACCATTG GTGGGAAGTC CTTTAAGTTA
CCTAAACCAT TCATGGTTAT TGCAACCCAG GACCCAAGGG AATTAAGCGG CACTTACCCA
CTCCCTGAGG CTCAATTAGA CAGATTCATG ACTAGGATTT ACTTAACTTA CCCAAGCTTT
GATGAGGAGG TTCAAATAAG CATAAACACT AACCTAGGTA GGGTTGAGTT AGTTAGGCAA
GTTATCTCAA TTGAGGAGTT AAATAAATTG ATTGACCAGG TTGATGGAGT TAAGTTAACG
CGCCCAGTGG CTAATTATAT AGTTAACGTG GTTAGGGCAA CAAGGGAGTA TAAGGGTGTT
AGGCTTGGGG CCAGTACTAG GGCTATTCAA ATGCTTAGTA GGTTAGCTAG GGCCTGGGCA
TTGATTCATG AGAGGAATTA CGTAGTCCCA GAGGATGTAA TTAAAGTTGC ACCATACGTG
CTAGCCCACA GGATCTTCTC CTCATCAGTT GATCCGGAGA AGGTTATTGA GGATGTTTTA
AAGGGTGTTG AAACCCCTGA GGCTAGTTTA ATAAGGAGGT AA
|
|---|
| Protein sequence | MSDTQAVGTV LSRMLTELSK VIVGYEEEAT VMFATLLASG HVLLEGVPGV GKTTLAKAFA
KTLSLSFSRI QFTPDLLPSD VVGTVVYNPK INDFEVKLGP IFANIVLADE INRAPPKTQA
GLLEAMQEGQ VTIGGKSFKL PKPFMVIATQ DPRELSGTYP LPEAQLDRFM TRIYLTYPSF
DEEVQISINT NLGRVELVRQ VISIEELNKL IDQVDGVKLT RPVANYIVNV VRATREYKGV
RLGASTRAIQ MLSRLARAWA LIHERNYVVP EDVIKVAPYV LAHRIFSSSV DPEKVIEDVL
KGVETPEASL IRR
|
|---|
| |