Gene Cmaq_0531 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCmaq_0531 
Symbol 
ID5710223 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaldivirga maquilingensis IC-167 
KingdomArchaea 
Replicon accessionNC_009954 
Strand
Start bp565424 
End bp565909 
Gene Length486 bp 
Protein Length161 aa 
Translation table11 
GC content42% 
IMG OID641275036 
ProductPaREP1 protein 
Protein accessionYP_001540366 
Protein GI159041114 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.372762 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value0.812753 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGAAATAC CTAAGGAGTT AATAAGAATA GCTGAGGAGA AGGGTATTAA TATAGTTGAC 
TTAGTGCTAA GTGAAATATC TAAAAGTGAT CCGTCAGAGA GCATGAGGAT AAGACTAGAC
TTGGCTAGGA AATACATTAG TGAAGCTAGG GAGTATTTAG CTAAGGGTGA TGCTGTTCAA
GCCAGTGAGA AAGCCTATAA GGCTGCTGAG GAGACTGTGA AAGCATTAGC TGAGAAGTAT
AATTTACCTG AACACCAATC AGCCGTGAGG GAGGGTAGAT GGTACACTTA CCGATTAGGC
TCCGCTGTTA GTAAGCTGAA GGCGTTAGGC GATTGGGTAT TGAGTGGATG GGGTAGTGCG
TATTTTCTTC ATGTGTATGG TTTTCATGAA GCTAAGTTAT CTGTGGATGA TGTAGCTGTA
TATATGAGTG AGGTTGAGAA GATGATTAAG GAAGCTGAGA AAATACTAGC GTCAGCATCC
CATTGA
 
Protein sequence
MEIPKELIRI AEEKGINIVD LVLSEISKSD PSESMRIRLD LARKYISEAR EYLAKGDAVQ 
ASEKAYKAAE ETVKALAEKY NLPEHQSAVR EGRWYTYRLG SAVSKLKALG DWVLSGWGSA
YFLHVYGFHE AKLSVDDVAV YMSEVEKMIK EAEKILASAS H