Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cmaq_0531 |
Symbol | |
ID | 5710223 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Caldivirga maquilingensis IC-167 |
Kingdom | Archaea |
Replicon accession | NC_009954 |
Strand | - |
Start bp | 565424 |
End bp | 565909 |
Gene Length | 486 bp |
Protein Length | 161 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 641275036 |
Product | PaREP1 protein |
Protein accession | YP_001540366 |
Protein GI | 159041114 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.372762 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 0.812753 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGAAATAC CTAAGGAGTT AATAAGAATA GCTGAGGAGA AGGGTATTAA TATAGTTGAC TTAGTGCTAA GTGAAATATC TAAAAGTGAT CCGTCAGAGA GCATGAGGAT AAGACTAGAC TTGGCTAGGA AATACATTAG TGAAGCTAGG GAGTATTTAG CTAAGGGTGA TGCTGTTCAA GCCAGTGAGA AAGCCTATAA GGCTGCTGAG GAGACTGTGA AAGCATTAGC TGAGAAGTAT AATTTACCTG AACACCAATC AGCCGTGAGG GAGGGTAGAT GGTACACTTA CCGATTAGGC TCCGCTGTTA GTAAGCTGAA GGCGTTAGGC GATTGGGTAT TGAGTGGATG GGGTAGTGCG TATTTTCTTC ATGTGTATGG TTTTCATGAA GCTAAGTTAT CTGTGGATGA TGTAGCTGTA TATATGAGTG AGGTTGAGAA GATGATTAAG GAAGCTGAGA AAATACTAGC GTCAGCATCC CATTGA
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Protein sequence | MEIPKELIRI AEEKGINIVD LVLSEISKSD PSESMRIRLD LARKYISEAR EYLAKGDAVQ ASEKAYKAAE ETVKALAEKY NLPEHQSAVR EGRWYTYRLG SAVSKLKALG DWVLSGWGSA YFLHVYGFHE AKLSVDDVAV YMSEVEKMIK EAEKILASAS H
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