Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cmaq_0527 |
Symbol | |
ID | 5709387 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Caldivirga maquilingensis IC-167 |
Kingdom | Archaea |
Replicon accession | NC_009954 |
Strand | - |
Start bp | 560242 |
End bp | 560943 |
Gene Length | 702 bp |
Protein Length | 233 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 641275032 |
Product | hydrolase |
Protein accession | YP_001540362 |
Protein GI | 159041110 |
COG category | [R] General function prediction only |
COG ID | [COG1011] Predicted hydrolase (HAD superfamily) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 46 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 41 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTAGTAT TATTCATGGA GGTTATGGAC ACTTTAGCAA GCCTAGAGGG CTTCGCCCAG GAAATGGCCT CACTAATTAA GAGGGAGGTG GATATTAAGG CTAATGAGGA TGAGGTAGCC GCCCTAATAG CCAATGAGTG GTCAAGTAGA TATAATCAAT TAGTGACCTC AGGCAACTAT AGGTCGCTTA GAAGCCTTGC CAGGGACGTA ATGCTAACGG TCACTAGAAA ATACTCCCTA GGCCTAGGTG GTAGGGAGCT TGAGTACTGG GGTGATGCCT TAGCCAACGC CTTCGTTACC GTGGCTAAGA TCTATGATGA TGTTGAGCCA GCCTTAAATG AGTTAAGTAA TCTTGGGGTT CAGATGTACA TATTAACTAA CCTGGATAAT GACATAGCTA AGAAGATTCT ACTCAAGAAT GGTCTACTAA GGTTCTTTAA GGGCGTAATA AGCTCAGACT TAACGAGAGC CGGTAAGCCT AATGCAAGAA TATTCAATGC AGCATTATAT AGGGCTAAGA TTAGTAAGGA TGATGCATTA ATAGTGAGTG GGCTAATTGA GGATATAATA GGAGGTAAGT TGAGTCAAAT AAAGACGGTT TTCGTGAATA GGAGGAAAAT TAACCTGACG GTTAAGCCAG ACTACATTAT AGGTAACTTA ACGGAGTTAC CTAAACTACT AGCTAATATG AGTAATCCAT AG
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Protein sequence | MVVLFMEVMD TLASLEGFAQ EMASLIKREV DIKANEDEVA ALIANEWSSR YNQLVTSGNY RSLRSLARDV MLTVTRKYSL GLGGRELEYW GDALANAFVT VAKIYDDVEP ALNELSNLGV QMYILTNLDN DIAKKILLKN GLLRFFKGVI SSDLTRAGKP NARIFNAALY RAKISKDDAL IVSGLIEDII GGKLSQIKTV FVNRRKINLT VKPDYIIGNL TELPKLLANM SNP
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