Gene Cmaq_0527 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCmaq_0527 
Symbol 
ID5709387 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaldivirga maquilingensis IC-167 
KingdomArchaea 
Replicon accessionNC_009954 
Strand
Start bp560242 
End bp560943 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content42% 
IMG OID641275032 
Producthydrolase 
Protein accessionYP_001540362 
Protein GI159041110 
COG category[R] General function prediction only 
COG ID[COG1011] Predicted hydrolase (HAD superfamily) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones46 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTAGTAT TATTCATGGA GGTTATGGAC ACTTTAGCAA GCCTAGAGGG CTTCGCCCAG 
GAAATGGCCT CACTAATTAA GAGGGAGGTG GATATTAAGG CTAATGAGGA TGAGGTAGCC
GCCCTAATAG CCAATGAGTG GTCAAGTAGA TATAATCAAT TAGTGACCTC AGGCAACTAT
AGGTCGCTTA GAAGCCTTGC CAGGGACGTA ATGCTAACGG TCACTAGAAA ATACTCCCTA
GGCCTAGGTG GTAGGGAGCT TGAGTACTGG GGTGATGCCT TAGCCAACGC CTTCGTTACC
GTGGCTAAGA TCTATGATGA TGTTGAGCCA GCCTTAAATG AGTTAAGTAA TCTTGGGGTT
CAGATGTACA TATTAACTAA CCTGGATAAT GACATAGCTA AGAAGATTCT ACTCAAGAAT
GGTCTACTAA GGTTCTTTAA GGGCGTAATA AGCTCAGACT TAACGAGAGC CGGTAAGCCT
AATGCAAGAA TATTCAATGC AGCATTATAT AGGGCTAAGA TTAGTAAGGA TGATGCATTA
ATAGTGAGTG GGCTAATTGA GGATATAATA GGAGGTAAGT TGAGTCAAAT AAAGACGGTT
TTCGTGAATA GGAGGAAAAT TAACCTGACG GTTAAGCCAG ACTACATTAT AGGTAACTTA
ACGGAGTTAC CTAAACTACT AGCTAATATG AGTAATCCAT AG
 
Protein sequence
MVVLFMEVMD TLASLEGFAQ EMASLIKREV DIKANEDEVA ALIANEWSSR YNQLVTSGNY 
RSLRSLARDV MLTVTRKYSL GLGGRELEYW GDALANAFVT VAKIYDDVEP ALNELSNLGV
QMYILTNLDN DIAKKILLKN GLLRFFKGVI SSDLTRAGKP NARIFNAALY RAKISKDDAL
IVSGLIEDII GGKLSQIKTV FVNRRKINLT VKPDYIIGNL TELPKLLANM SNP