| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cmaq_0518 |
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| Symbol | |
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| ID | 5709549 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Caldivirga maquilingensis IC-167 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009954 |
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| Strand | - |
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| Start bp | 551389 |
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| End bp | 552135 |
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| Gene Length | 747 bp |
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| Protein Length | 248 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 641275022 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001540353 |
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| Protein GI | 159041101 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.175608 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 48 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTGGATT CAATTAAAGG TAAGACAGCC CTAGTGACTG GTGGCTCAAG TAGAATAGGT
AGGGTGATTT GTAATTACCT GGCTAGGGAG GGGGTTAATG TGGTGGTTCA CTATAATTCA
TCCATGGAGG AGGCCCTTAA GGTTAAGGAG GAGATTAATG GTTTAGGGGT TGAATCATGG
ATTATTAAAG CGGATTTATC CAAGCCCAGT GAGGTTAATG AATTAATTAA TGAATCCTTT
AAGCAGGCCG GTGAGGTTAA CTTCCTAATT AATAATGCCT CAGTATTCCC TAAGATAGGG
TTAAGCGACT TAAGCATTAG TGACTTAAAT CGGATCATGC AGGTGAATGC CTGGGCACCA
TTAATGCTTA CCCTGAGGTT CGCTAGTATG GTTAATGAAG GTAAGGTAGT TAATGTACTG
GACTCAATAG TGGATGGGTA TAATTTCGAG AGGTACGCCT ACTACCTAAG CAAGATCATG
CTTAATGCAG TAACAAGATC CCTGGCCCTT AAATTAGCCC CAAGGATAAC CGTTAACGCC
GTCGCCCCCG GCATTATACT TCCAGCTAAG GATGAGAATA CTGAACGCAT AGAGGCTATG
GTTAATCAAG TCCCCTTAAG GAGACGTGGA TCACCTGATG ATGTCGCCCA CGCCGTAGTG
TTTCTGCTTA AGAGTAGTTA CGTAACTGGT CAAGTAATAT ATGTTGACGG TGGGGAGCAT
CTTAAGCCCA GGGTGGTTTA TGAATGA
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| Protein sequence | MVDSIKGKTA LVTGGSSRIG RVICNYLARE GVNVVVHYNS SMEEALKVKE EINGLGVESW
IIKADLSKPS EVNELINESF KQAGEVNFLI NNASVFPKIG LSDLSISDLN RIMQVNAWAP
LMLTLRFASM VNEGKVVNVL DSIVDGYNFE RYAYYLSKIM LNAVTRSLAL KLAPRITVNA
VAPGIILPAK DENTERIEAM VNQVPLRRRG SPDDVAHAVV FLLKSSYVTG QVIYVDGGEH
LKPRVVYE
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