| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cmaq_0517 |
|---|
| Symbol | |
|---|
| ID | 5709894 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Caldivirga maquilingensis IC-167 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009954 |
|---|
| Strand | - |
|---|
| Start bp | 550517 |
|---|
| End bp | 551392 |
|---|
| Gene Length | 876 bp |
|---|
| Protein Length | 291 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 641275021 |
|---|
| Product | 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase |
|---|
| Protein accession | YP_001540352 |
|---|
| Protein GI | 159041100 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0801] 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase
[COG1539] Dihydroneopterin aldolase |
|---|
| TIGRFAM ID | [TIGR00525] dihydroneopterin aldolase
[TIGR00526] FolB domain
[TIGR01498] 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.200312 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 48 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCATGG GTTTATTCAA GATAGAGATT AGGGGGCTTA AGGTTAATAC AATCATTGGG
GTGAAGCCCA GTGAGAGGGC AAGGCCCCAG CCTGTGGTTA TTAATGTTGA GGCTTGGGCT
GACTTAAGTG AGGGGGCTGC TAAGGATTCC ATTGAATGCA CGGTTGATTA TAAGGTTCTT
AAGGATGAGT TAATCTCATA CGTTAGTAGT AGTGATTTTA AATTAATTGA AACCCTTGCT
GATAGGTTGG CTAAGGTTTG CCTGCAGGAT CATAGGGTTA GGATGGTTAA GGTTAGGGTT
GAGAAACCGG GTGCATTAAC CGGTGCCGAG GCGGCTGCAG TGGAGGTTTT TAGGAGGAGG
ATGAGTAAAT TGGCTAAGGT ATTCATAGCC GTTGGCTCAA ACATTAATCC CGAGTACAAT
GTTAGGGAAG CTGTTATTAG GGTTAGGAGG ATTCTCGGTC CATTAAGGGT ATCCACGGTT
TACTTAACTA AACCAATACC AGATAACCAA CCCCCCTATT ACAATTGCGT ATTAGAGGCT
GAAACAGCCC TAAGCCCAGT ATCGGTTAAG AGCGCGTTAA GGGGGATTGA GAGTGAGATG
GGTAGGGTTA GGGTGAGTGA TAAGTATGCC CCAAGGGTCA TTGACCTAGA CCTAATACTT
TACGGTAATT TAATAATTAA GAGTAATGAA TTAACCTTAC CTGACCCGGA GATAGGTAGT
AGGCCCTTCC TAACCCTACC TTTACTTGAG CTTGAACCAG ACTTAGTCAT ACCTGGGTTA
AATAAGGCAA TTAGGGAGTT GGCTAAGGGG GTTAGCGGCG AGGGTATGAA GCCTCTACCT
GATTACACCG AGGAGTTGAG GAGATTAGCC GGTTGA
|
|---|
| Protein sequence | MSMGLFKIEI RGLKVNTIIG VKPSERARPQ PVVINVEAWA DLSEGAAKDS IECTVDYKVL
KDELISYVSS SDFKLIETLA DRLAKVCLQD HRVRMVKVRV EKPGALTGAE AAAVEVFRRR
MSKLAKVFIA VGSNINPEYN VREAVIRVRR ILGPLRVSTV YLTKPIPDNQ PPYYNCVLEA
ETALSPVSVK SALRGIESEM GRVRVSDKYA PRVIDLDLIL YGNLIIKSNE LTLPDPEIGS
RPFLTLPLLE LEPDLVIPGL NKAIRELAKG VSGEGMKPLP DYTEELRRLA G
|
|---|
| |