Gene Cmaq_0503 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCmaq_0503 
Symbol 
ID5710036 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaldivirga maquilingensis IC-167 
KingdomArchaea 
Replicon accessionNC_009954 
Strand
Start bp539235 
End bp539717 
Gene Length483 bp 
Protein Length160 aa 
Translation table11 
GC content45% 
IMG OID641275007 
Productpeptidase S26B, signal peptidase 
Protein accessionYP_001540338 
Protein GI159041086 
COG category 
COG ID 
TIGRFAM ID[TIGR02228] signal peptidase I, archaeal type 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACTCTA GCAAGGTATT AAATATTGCT GGTTACGTTG CCTTAACAGT AATCTTAATT 
TACCTAGTGT TGAGCATAGC CGGCATCGTT AAGATACCCT GGGCCACAGT GGGTGGCTTC
AGCATGGAAC CCACCCTGGA GTCTGGTACA TTGGTTGTCC TATGCCCAGT GCCAAGTAAT
GTTACTGCGC TCCTCGGCCA CGTGGTTGTT TATGATCACT ACGGTGAGTA TATAATACAT
AGGGTCATTG AGGTTTATCC ATCAGCCAAC ACCTACTACG TGGTTACTAA GGGTGATGCA
AACCAAGTTG CTGACCCGTG GGAGACGCCT ATTAATCAAG TGTATGGGGT TGTTTGCTTA
AGCATGCAGT ACGTGGGTTT AATAACCCTG GTTCTTAGGA AGCCCCCCAC GTTAATACTG
GCTATAGTGG TTATGATTAT TCTTTGGCTT GCATTAAATG AGGTTGAGAA GAAGGTTAAA
TGA
 
Protein sequence
MDSSKVLNIA GYVALTVILI YLVLSIAGIV KIPWATVGGF SMEPTLESGT LVVLCPVPSN 
VTALLGHVVV YDHYGEYIIH RVIEVYPSAN TYYVVTKGDA NQVADPWETP INQVYGVVCL
SMQYVGLITL VLRKPPTLIL AIVVMIILWL ALNEVEKKVK