| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cmaq_0488 |
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| Symbol | |
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| ID | 5708583 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Caldivirga maquilingensis IC-167 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009954 |
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| Strand | + |
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| Start bp | 525083 |
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| End bp | 525943 |
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| Gene Length | 861 bp |
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| Protein Length | 286 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641274992 |
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| Product | ribose-phosphate pyrophosphokinase |
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| Protein accession | YP_001540323 |
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| Protein GI | 159041071 |
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| COG category | [E] Amino acid transport and metabolism
[F] Nucleotide transport and metabolism |
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| COG ID | [COG0462] Phosphoribosylpyrophosphate synthetase |
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| TIGRFAM ID | [TIGR01251] ribose-phosphate pyrophosphokinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.0430198 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCAGAGGA TTGTGCTCTA CGATGAATTC TCAAGGGACC TGGGGCCTAA CGTAGCCTCC
AGGATTGGGG CTGAGGCCAG AGAGATTACA CGTAAGGTTT TCCCCGATGG TGAACAATAC
ATTAGGGTTG AGGCTAATGT GAAGGGTAGT GATGTACTTT ACGTAACTAG GCTTTACCCC
AATCAGGACC AAGGGCTAAT TAGGGTTATG CTACTGCTTG ACGCTGTTAA GGGCCTGGGG
GCAGCCAGGG TGGGCTTATT CATACCCTAC ATGCCCTACG CCAGGCAGGA TAGAAGATTC
CTTGAGGGTG AACCCATTAG CATTAACGTA ATACTCAACG TGCTTAAGGG CCTTGGGGTT
GATTACCTAT ACGTGGTTGA TATCCATAAG CCACAAAGCC TTGAGGGTTA CCCAGGCTTC
ATTAACCTTA AGCCATTTAA ACTATACGCA GAGGGACTTG GAGGCTTAAG TAAACCAGTT
GTAATTAGCC CAGACTTAGG CTCCCTATGG AGGGCTGAGG AGTTGGCTAA GGCGCTTGGC
GTTGAGTATG ATTACCTCGA GAAGCATAGG GATAGATACA GTGGGGAGGT TTCATTCACC
CTAAGGAACC TTAACGTTAA GGGTAAGGAC GTGGTTATTA TTGATGATAT AATATCAACA
GGAGGCACAA TAATAGGCGC AGCAGGAATG CTGAGAAGCA TGGGGGCAAC CAGCATTAAT
GTGATAGCCA CCCACTGCAT AATGATCGGT GACGCCGAGG CTAAGTTAAC TAAGGCAGTT
GATAAAATAC ACTGCAGCAA CAGTATACTG GGCAAGTACT CCCAATTCGA TGTCTCACAA
TTAATAACCA GTAATGGTTA G
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| Protein sequence | MQRIVLYDEF SRDLGPNVAS RIGAEAREIT RKVFPDGEQY IRVEANVKGS DVLYVTRLYP
NQDQGLIRVM LLLDAVKGLG AARVGLFIPY MPYARQDRRF LEGEPISINV ILNVLKGLGV
DYLYVVDIHK PQSLEGYPGF INLKPFKLYA EGLGGLSKPV VISPDLGSLW RAEELAKALG
VEYDYLEKHR DRYSGEVSFT LRNLNVKGKD VVIIDDIIST GGTIIGAAGM LRSMGATSIN
VIATHCIMIG DAEAKLTKAV DKIHCSNSIL GKYSQFDVSQ LITSNG
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