| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cmaq_0486 |
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| Symbol | |
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| ID | 5709923 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Caldivirga maquilingensis IC-167 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009954 |
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| Strand | + |
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| Start bp | 523195 |
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| End bp | 524388 |
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| Gene Length | 1194 bp |
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| Protein Length | 397 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641274990 |
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| Product | FAD-dependent pyridine nucleotide-disulphide oxidoreductase |
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| Protein accession | YP_001540321 |
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| Protein GI | 159041069 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1252] NADH dehydrogenase, FAD-containing subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.409474 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.0139232 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGTGATG GTAGAAGAAG AGTTATCATT ATTGGTGGGG GGACTGGTGG ATTAGTGTTG
GCTAATAGGC TACCTAAGGA TGAGTTTGAG GTTACTGTTA TTGATAAGCA ACCCTACAAT
TACTTCCTAC CCTGGCTACT CTACATTGCC TTTAAGGGAT CTAGGAGGAA TATTAAGAGG
GAGATTAGGG ATCTTATTAA GCCTTGGGTT AACTTCATTC AGTCGGGAGC CAGGTTAATT
AACCTTAATG ATAGGTACGT TGAGTTGGAT AATGGTAAGA GACTGAGTTA CGATTACCTA
GTAGTGGCCA CTGGGGCAAC GGTGGATTAC TCTAAGGTAC CTGGATTAGA CCAGTTAACT
GAACTCTACG GTGACTACCA TAGTAGTGAG GAGAACGCAT GGAGAGTGTG GAGGACTGTG
AACAGTATTA ATGAGGGTAC GTTAGCCTTC ATACTATCCT ACGAACGCTA CAGGTGCCCT
CCAAGCCCAC TTGAGGGGGT TCTTTTAGCT GATGAACTCC TCAGGAGAAG GGGGGTTAGG
GATAGGGTTA ACTTGGTTTA CGCAACATCA TACCCAAGGC CATACCCAGC TGAACCAATG
AATGAGGTGG TGGAACCCAT ACTTAAGGAG AGGGGTATTG AGACTGTTAC CTTCTTCACC
CTAGATCACG TTGACGCTAA GGATGGTGTA GCCTACTCCC TTGAGGGTGA GGAGCTTAAG
TTTAATGCAG CCATAGTAAT ACCACCCCAC GTTGGTGTGG GCATAAAGTA TAACCCAGAT
AATGTGCTTG ACCAGGATGG ATTCGTACTG GCTGATAACG CCACCAATAG GATTAAGGGC
TTTGATGATG CCTTCGTAAT AGGGGATGCG TCAGCATTAC CAGTGGCTAA GACTGGTGTA
ACAGCCCACC TGCAGGCCAC CGTTGTGGCT AAGATACTCA CCGGTGAGGA TGCCTGCAAC
ACAGGTAGGA CTCATTGTCC CTTCGACATG GGTTATGGAT TAGCAACCTT CGTGATAAGT
GATAGTAAGC ATGGTGTAGT TAAGTATCCG CCCAATAGAA TTAACCACTT CCTTAAATTA
ACCTTCGCTG CATCATACTG GAGTATGCTG AAGTACCCTG AATTATGGGA CCCATTAATG
GAAGCTTACT TTGAAGCCAC ATCCCCTGAG AGGTTAATTG GTTTATTCAG GTGA
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| Protein sequence | MSDGRRRVII IGGGTGGLVL ANRLPKDEFE VTVIDKQPYN YFLPWLLYIA FKGSRRNIKR
EIRDLIKPWV NFIQSGARLI NLNDRYVELD NGKRLSYDYL VVATGATVDY SKVPGLDQLT
ELYGDYHSSE ENAWRVWRTV NSINEGTLAF ILSYERYRCP PSPLEGVLLA DELLRRRGVR
DRVNLVYATS YPRPYPAEPM NEVVEPILKE RGIETVTFFT LDHVDAKDGV AYSLEGEELK
FNAAIVIPPH VGVGIKYNPD NVLDQDGFVL ADNATNRIKG FDDAFVIGDA SALPVAKTGV
TAHLQATVVA KILTGEDACN TGRTHCPFDM GYGLATFVIS DSKHGVVKYP PNRINHFLKL
TFAASYWSML KYPELWDPLM EAYFEATSPE RLIGLFR
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