Gene Cmaq_0479 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCmaq_0479 
Symbol 
ID5708673 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaldivirga maquilingensis IC-167 
KingdomArchaea 
Replicon accessionNC_009954 
Strand
Start bp517074 
End bp518351 
Gene Length1278 bp 
Protein Length425 aa 
Translation table11 
GC content49% 
IMG OID641274982 
Productelectron-transferring-flavoprotein dehydrogenase 
Protein accessionYP_001540314 
Protein GI159041062 
COG category[C] Energy production and conversion 
COG ID[COG0644] Dehydrogenases (flavoproteins) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000230935 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.000263259 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
GTGAGTCAAA GGTTTGACGT CATAGTTGTG GGCGCCGGGC CAGGTGGATT AACGGCTGCC 
CAGAGGTTGG CCTCAGGGGG ATTTAAGGTT CTAGTGGTTG AGAGGGGTCG TAGGCCTGGG
AGTAAGAACG TCTACGGTGG TAGAATATAC GCCCACGTCC TCGATAAACT CTACCCAGAG
TACGTTAAGG AGGCTCCAGT GGAGCGTTGG GTTAGGAAGG AGCGCTTAAC AATGCTGACT
AAGGATAGTG GGGTAACTGT TGAGTTTGAG ACTAAGGCCA CTGAGCATAA GTCCTTCACA
GCATACCTAT CCAGCTTCAC TGAGTGGCTG GATAGGAAGG CTGAGGCCGC TGGGGCACTT
GTGGTTACTG AAACCCCTGT GGATAGTTTA ATCACTAAGG ATGGTAAGGT CATTGGTATT
AGGTCCGGGA GCGATGAGGT CTACGGTGAC GTAGTTATTG TGGCTGAGGG CATTAATAGG
CTTGTCCTAG AATCAAGCGG CCTAGCCCCG AAGCTTCAAC CAAGCGTGGT TGGACTTGGG
GTTAAGGAGG TTATTAAGTT GAGTAGGGGT GAGATTAATG AGAGGTTTAA CCTAGATGAG
GATGAGGGCC TAGCCTGGGC CCTGGCAGGG TACCCAACCC ACTACGTACC CGGTGGAGCA
TTCCTATACA CTAATAAGGA TGCGGTAACA CTGGGTATTG TTGTTTACCT TGAGCATGGT
AATAAACTTG ACGTGCCTGT TTACGACCTA ATAGAGGAGT TTAGGCTACA CCCATTCATA
AGTAGGCTAC TTAAGGGTGG TCAATTACTG GAGTACTCAG CGCACTTAAC GCCCATAGCA
GGCTTAAAGG CGATGCCGCC TAGGCTATAC GGTAACGGTT ACCTAGTGGT CGGTGATGCC
GCAGGCTTCC TGCTTCATCT GGGTGTTTTA ATTAGGGGTG TTGACTTCGC AATGGAGAGT
GGTAGACTTG CCGCTGAGGC GGTTATTAAG GCTCATGACC AGGGTAAATA TGATGAGGAG
GCCCTATCCG TTTACCAGCA GTTGCTTAAT GAAAGTTTCG TACTCAGGGA GTTCAACACT
TTTAAGAATG CCCACAAGGT CTTAAATAAC CCCAGATTGT ACAGTGACTA CGTTATGCTC
GCTAACGCAT TCATGAGCAG GTACTTTGAT GTTGATGGGA CACCTAGGAG GATTTGGGAC
ACTTTCATGA AGGCTAAGGG TAATTTAACC CTAGTTGACT TAACTAAGGA CGCCTTAAGC
CTGGTGATGA ACCTATGA
 
Protein sequence
MSQRFDVIVV GAGPGGLTAA QRLASGGFKV LVVERGRRPG SKNVYGGRIY AHVLDKLYPE 
YVKEAPVERW VRKERLTMLT KDSGVTVEFE TKATEHKSFT AYLSSFTEWL DRKAEAAGAL
VVTETPVDSL ITKDGKVIGI RSGSDEVYGD VVIVAEGINR LVLESSGLAP KLQPSVVGLG
VKEVIKLSRG EINERFNLDE DEGLAWALAG YPTHYVPGGA FLYTNKDAVT LGIVVYLEHG
NKLDVPVYDL IEEFRLHPFI SRLLKGGQLL EYSAHLTPIA GLKAMPPRLY GNGYLVVGDA
AGFLLHLGVL IRGVDFAMES GRLAAEAVIK AHDQGKYDEE ALSVYQQLLN ESFVLREFNT
FKNAHKVLNN PRLYSDYVML ANAFMSRYFD VDGTPRRIWD TFMKAKGNLT LVDLTKDALS
LVMNL