| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cmaq_0474 |
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| Symbol | |
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| ID | 5710290 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Caldivirga maquilingensis IC-167 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009954 |
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| Strand | - |
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| Start bp | 513349 |
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| End bp | 514218 |
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| Gene Length | 870 bp |
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| Protein Length | 289 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641274977 |
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| Product | TatD-related deoxyribonuclease |
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| Protein accession | YP_001540309 |
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| Protein GI | 159041057 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1831] Predicted metal-dependent hydrolase (urease superfamily) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0000000311622 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.000569321 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGTAAGG CATTACCAAT AGCTGATAAC CACACCCACG TTAACCCGGT TAAGGGTCTT
GGACCAAGGG AAGTGGCTAG GAGGTTTAAG AGAACTGGGG GTTGGTTCAT GGGTGTTGTA
GCCCTATTAA CCTGGGACCT AGGCTTAAAC CCAGGTGACT TGAGTAATGT TGATAAAATG
TATAGGTTAA CCATTGAGTC AACTAAGATT ATTCAAGGGG AGGGAGTTAA GGCAGTTGCC
GTAGTTGGCG TGCACCCAGC TGAGTGCGTT AAGTTGCTTG AATCAGGTTG GGGCTTCAGT
GAAGTTAAGG AATTCATGAT TAAGACAATT GACTTAGCTG CACAGTACAT TAGGAGGGGT
GAGGCAGTGG GTATTGGGGA GATTGGTAGA CCTCATTGGA GCGTTAATGA GGGTGTAGTT
GACTTATGTA ATGAGATCAT TGAGTACGCC ATGGGTACTG CAAGGGACCT CAACGCCATT
ATTCACCTAC ACCTTGAGAG GAAGGGTGAG GCCACTGTTA AGTCAATAGT GGAGTTGGCT
AATAAGGCTG GGGTTAAGGA TAAGGGGAGG ATCATCCTCC ACCACGCCTC ACCAAGCATG
GTTAAGCCAG CTGTGGATAA TGAACTAAAA CCCTCAATAC CAGTGGGTAG GAGGGGTGAG
TTTGAGGAGG CTGTTAAGTT AACTAAGGCC CTAGTGGTTG AGAGTGATTA CGCTGATGAC
CCAAGGAGAC CAGGTATGGT TATACCACCC TGGAGGATAC TGAGTAGGAT TAATAATGCC
TTGAACCAAG GCCTATTGAG TGAAGATGAT GCGTTTAGAA TTATGGTTAA TGAAATTGAG
GAAACATATG GGGTTAAGTA CGAGGGATGA
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| Protein sequence | MSKALPIADN HTHVNPVKGL GPREVARRFK RTGGWFMGVV ALLTWDLGLN PGDLSNVDKM
YRLTIESTKI IQGEGVKAVA VVGVHPAECV KLLESGWGFS EVKEFMIKTI DLAAQYIRRG
EAVGIGEIGR PHWSVNEGVV DLCNEIIEYA MGTARDLNAI IHLHLERKGE ATVKSIVELA
NKAGVKDKGR IILHHASPSM VKPAVDNELK PSIPVGRRGE FEEAVKLTKA LVVESDYADD
PRRPGMVIPP WRILSRINNA LNQGLLSEDD AFRIMVNEIE ETYGVKYEG
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